KEGG   Mya arenaria (softshell): 128245030
Entry
128245030         CDS       T09995                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
maea  Mya arenaria (softshell)
Pathway
maea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128245030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128245030
   03041 Spliceosome [BR:maea03041]
    128245030
   03032 DNA replication proteins [BR:maea03032]
    128245030
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     128245030
Spliceosome [BR:maea03041]
 Complex A
  U1 snRNP components
   Sm proteins
    128245030
  U2 snRNP components
    128245030
 Complex B
  U1 snRNP components
    128245030
  U4/U6.U5 tri-snRNP components
    128245030
 Complex C
  U2 snRNP components
    128245030
DNA replication proteins [BR:maea03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     128245030
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 128245030
NCBI-ProteinID: XP_052819185
LinkDB
Position
8:35468523..35481722
AA seq 176 aa
MVVGKSSKMLQHINYRMRCTLQDGRTFVGTFKAFDKHMNLILGDCDEFRKVKPKTAKSGE
REEKRSLGLVLLRGEHLVSMTVEGPPPSEDGMSRVPLSGAAPGAGVGRAAGRGVQSGPGG
AAPGLQGPVRGVGGPSQQMMNPQAGMMRGGMMGRGGPPPGMRGPPPGMMRGQGPRF
NT seq 531 nt   +upstreamnt  +downstreamnt
atggtcgtggggaagagctccaagatgctgcagcacatcaactaccggatgcgctgtacg
cttcaggatggtagaacttttgtcggcacatttaaagcctttgataaacacatgaacttg
attcttggggactgtgatgagttcagaaaggtcaagcctaaaaccgcaaaatctggtgag
cgagaagaaaagagaagtttgggactggttttattacgaggggaacatcttgtgtctatg
acagttgaaggacctccaccatcagaggatggtatgtcgcgtgtgccactttcgggagca
gccccaggtgcaggtgttggtcgggcagcagggcggggtgtacaaagtggaccagggggt
gcagcccctggcctccagggtcctgtaaggggggttgggggaccctcgcagcaaatgatg
aacccacaagcaggtatgatgcgtggaggtatgatgggacgtggtgggccaccaccgggc
atgaggggacccccaccaggcatgatgagaggccagggtccaagattctaa

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