KEGG   Molothrus aeneus (bronzed cowbird): 136563002
Entry
136563002         CDS       T11621                                 
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
  KO
K08020  Rap guanine nucleotide exchange factor 6
Organism
maen  Molothrus aeneus (bronzed cowbird)
Pathway
maen04517  IgSF CAM signaling
maen04530  Tight junction
Brite
KEGG Orthology (KO) [BR:maen00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    136563002 (RAPGEF6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    136563002 (RAPGEF6)
SSDB
Motif
Pfam: RasGEF RA RasGEF_N PDZ cNMP_binding PDZ_6 RA_2 PDZ_2
Other DBs
NCBI-GeneID: 136563002
NCBI-ProteinID: XP_066416229
LinkDB
Position
15:complement(10612234..10734384)
AA seq 1656 aa
MSAPVEPRIKQALRKKPAERTPEDLNTIYSFLHGLDILSHFREHQLRIMSSSARYERYKG
NQVLFCSETIARCWYILLSGSVLMKDSMFLPPCSFGKQSGGKRGCECIILEPSEMIVVEN
SKDNEENILQREVPLRQSRRRYRRINQRGERQTITDSVDSSSYLSLPADLTKMHLTDNPH
PQVTHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDVDLTGLPEAPVDSEDEEEEEDED
IDRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIF
EVVEQAGAIILEDGQELDSWYVILNGTVEITYPDGKSESLCMGNSFGITPSLDKQYMNGV
VRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIK
ATPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLTSPLEVGNKLLEWFTVDSLRDKVTRVV
LLWVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMKGHLRLLNIACAAKAKWRQITLQKPSR
DSPLFFSLLGGSDKGFGIFVETVEIGSKAAEAGLKRGDQIMEVNGQNFENITFVKALEIL
KNNTHLSITVKTNIFVFKELLCRIGQEKNGIPHIPKIAEKKNNRYSIPDMPGDVEQMFPR
EKGNKKMKANTVSGGRNRIRKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQCRHSLA
IMPIPGTLSSSSPDLLQPTTSILDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTT
AKEVVSHAVHEFNLTGAPETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLKN
NMETETLCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYIDDLYKLD
SKTGNAHLKQFEDVINQETFWVAMEILAEPNQLKRMKIIKHFIKIALHCRECKNFNSMFA
VISGLNLAPVARLRGTWEKLPSKYEKHLRDLQDLFDPSRNMAKYRNILSSQSMQPPIIPL
FPVVKKDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAVMFRQRKKRWR
SLGSLSQGSMNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLTVETDE
EKIQILSLQCEPAYSTLTKNLSERRGGKSSEMSPVPMRSIGQTTKAHQHQQNRMSQVLQV
PTVNLYPSRKKGLTKDHVTFSTGSPQKSLSLSEEVSSKKQTDDTMSMASSLHSSPPASPQ
GSPRKVGNIQRSDNCSQMNLSGSSSSLASETSNKNSGQRSYGIGYALIPSTKSDNFSDSS
HSEISSRSSIVSNCSVDSMSAALQDERALSQSLLVVDSGGAERKEHPQALTDYGQPCPGW
SITRPALIRGMAFTSSMSSEEISHEHITVEAADSGRGSWTSCSSSSHDNFQNIPNQKSWD
LLSSYRHTQLDGPIAEVDPTNYHSEEGYLYSEAFSKANRQSKASVELDQSRQSWASSSSL
SDTYETNYGTIKRRGLENSSAEQTEALDSKAGADTTYKTVTSSTEKGLIVYCVTSPKKDD
RYREPPPTPPGYMGISLADIKEGSPHHPHLKPPDYSVAVQRSKMLHSDLSRLPQDAVACV
SSRMPQWHGRQPSSPRVAELPDADSEEDEDEQVSAV
NT seq 4971 nt   +upstreamnt  +downstreamnt
atgagcgccccggtggagcccaggatcaaacaggcgctgcggaaaaagcccgccgagcgg
actccggaggacttgaatactatctattctttccttcatgggctggacatactatcacac
ttcagggaacatcagctaagaataatgtcgtcaagcgcccgctatgagaggtacaagggc
aaccaagttctcttttgttcagaaactattgcaagatgctggtatatcctgctttctgga
tctgtgctcatgaaggattcaatgtttttgccaccttgcagttttggcaagcagtctgga
ggaaagcgaggatgcgaatgtatcatattggaaccctcagaaatgattgtggtggagaac
tccaaggacaatgaggagaacatcttgcagagggaggtgccgctgcggcagtcccgccgc
aggtaccggaggatcaaccagcggggcgagcgccagaccatcaccgacagcgtggactcc
agcagctacctgtcgcttccagctgaccttaccaagatgcacctcacggacaatcctcat
ccccaggtgacgcacgtgccctccagccagtcagggtgcagcattgccagtgactctggg
agcagcagcctctctgatatttatcaggctacagaaagtgagatgggagatgttgattta
acgggtcttccggaagcacctgtagactctgaagatgaagaagaggaggaagatgaagat
attgacagaacttctgatccacttctagggcgagatgttgtccgagagtgccttgagaaa
gagcctgcagataaaactgatgatgacattgaacaattattggaattcatgcatcaactc
cctgcctttgccaacatgaccatgtctgtgaggagagaactgtgctcagtgatgatcttt
gaagtcgtggagcaagcaggagccatcatacttgaagatggccaggaacttgattcttgg
tacgttattttaaatggcacagtagaaatcacctatcctgatggcaagagtgagagtctc
tgtatgggaaatagttttgggattactccctcactggacaaacagtacatgaatggagtg
gtcagaaccaaagtagatgattgtcagtttgtgtgtatagcccagcaagactactggagg
attctgaaccatgtagaaaaaaacactcacaaagtggaggaagaaggagaaattgtgatg
gtaaaggagcacagggagctggatcgcagtggaaccaggaaaggacacatagttatcaag
gcaacacccgagagactcatcatgcacttaatagaggaacattctattgtggatccaacc
tacatcgaagattttcttttaacatacagaacatttctaacaagtcccttggaagttgga
aataaactcttggaatggttcacagtggacagcctcagggataaggttaccagagtagtg
ttactgtgggtgaacaatcattttaatgactttgaaggagatcctgccatgactcgattc
ctggaagaatttgaaaagaacttggaagatacgaaaatgaaaggccatctcagattgctg
aatattgcctgtgctgccaaagcaaaatggaggcaaatcaccctgcaaaaaccttccaga
gattctcccctgtttttcagccttctaggaggcagtgacaaagggtttggtatttttgta
gagactgtggagataggtagcaaagcagcagaagctggacttaaacgtggtgatcagata
atggaagtaaatggacagaattttgagaacattacctttgtaaaagctctggaaatctta
aagaataacacacatctctccattactgtaaaaacaaacatttttgtgtttaaggagctg
ctctgcaggataggacaggagaagaatggaattccacatattccaaaaattgcagaaaag
aaaaacaaccgttattctatcccagatatgcctggagatgtggaacagatgtttccccgt
gaaaaaggaaacaagaaaatgaaagctaacactgtatctggtgggagaaacagaatcagg
aaaattttagacaagacccgtttcagcatcttgcctccaaaactgttcagcgacggcagc
gtgagccagtcccaggatgacagcatcgtggggacacggcagtgccggcacagcctggcc
atcatgcccatcccgggcaccctttcatctagcagccctgacctgctgcagcccacaacc
agcattctggatttctctaacccttcagctgttgggttttactatattccagatcaagtg
atccgagttttcaaagcagatcagcagagctgttacatcatcatcagcaaagacactaca
gcaaaggaggtggtgagtcatgctgtccatgagttcaacctgacaggagcccctgagacc
tactccctgtgtgaggtgtccgtcagtcccgagggggtcatcaagcagcggcgcctcccg
gaccagttctccaagctggctgacaggatccagctcaacggacggtattatctgaaaaac
aatatggaaacagaaaccttatgctcagatgaggatgctcaagagctactccgagagagc
caaatttccctcctgcagctgagcaccattgaggtggccactcagctttccatgcgggac
tttgaattgttccgcaacatcgagccaacggagtacatcgacgacctgtacaagctggac
tccaaaacaggcaacgctcacctgaaacagtttgaggatgtcataaatcaagagaccttc
tgggttgccatggaaattttagcagaacccaaccagctcaaaagaatgaagattattaag
catttcattaaaattgctctccactgtcgagaatgcaagaacttcaattccatgtttgcg
gtgataagtgggttaaatcttgcaccagtagcccgtctcagaggcacttgggaaaagtta
cccagcaagtatgaaaagcacctcagagaccttcaagatctttttgatccatctcgaaac
atggcaaaatatcgcaacatcctcagcagccagagcatgcagcctccaattatcccactt
ttccctgttgtcaagaaagatatcacatttctgcatgaaggcaatgattctaaagtggat
ggcctggttaattttgagaagctgcggatgatcgccaaggaaatccgccaagttgtccga
atgacctcggcaaacatggatccagctgtgatgttcagacaaaggaagaagaggtggaga
agtttggggtctctgagccagggcagcatgaactcgaacatgctggacgtgcagggaggg
gctcacaagaagcgcgcccgccgcagctcgctcctcaacgccaagaagctctacgaggat
gcccagatggccaggaaggtgaagcagtacctgtccaacctcactgtggagacagatgaa
gagaagatccagatattgtcgcttcagtgtgagcctgcatacagcactttgacaaagaat
ttaagtgagagaagaggagggaaatcctccgaaatgtctccagtgcccatgagatcaatt
ggccaaaccacaaaagcccatcagcatcaacaaaaccgaatgagtcaagttcttcaggtc
ccaactgtgaatttgtaccccagcaggaaaaagggactgacaaaggatcatgtcacattc
agtacaggctctccacagaagtcattaagcttgtctgaggaagtaagtagtaagaaacaa
acagatgacactatgtccatggcatcttctttgcactccagcccacctgcttctcctcag
ggctccccacgcaaagttggcaacatccaaaggtcggataactgcagtcagatgaatctc
tctggctcttcctcatcactggccagtgaaaccagcaacaagaacagtggacagcgcagc
tatggaataggctatgccctcataccttccactaaatctgacaacttctcagactccagc
cacagtgagatttcctcccgctccagcatcgtgagcaactgctccgtggactccatgtca
gcagcgctgcaggacgagagggctttgtcccagtccctcctcgtggtggattcaggcggg
gcagagaggaaggagcatcctcaggcactcacagattatggccagccctgcccaggctgg
tccatcactaggcctgctctgatcagagggatggcattcacatcttccatgagcagcgag
gagatctcccatgagcacatcacggtagaggcagcagacagtggccggggcagctggact
tcatgctcaagtagctctcatgacaatttccagaatatcccaaaccagaagagctgggat
ctcctcagttcttaccgtcacacccagctggatggacctatagctgaagtggatcccaca
aactatcactctgaggagggttatttgtattctgaagccttttccaaagccaacaggcaa
tcgaaagccagcgtggagctggaccagtctcggcagagctgggcatcctccagctccctg
tcagacacttacgagacaaactatgggacaattaagcggagggggctggagaactcctcg
gcagagcagacggaggctttggactctaaagcaggcgctgatacaacttacaaaactgtt
acttcgagcacagaaaaaggcctgatagtgtactgtgtcacctcacctaagaaggacgat
aggtatagggagccaccgcccacccctccgggatatatggggatttctttagcggacatt
aaagaaggatcgccccaccacccacacctcaaacctccagactatagtgtggcagtgcag
aggtcaaagatgctgcacagtgacctgtctagactgccccaggacgcggtggcctgtgtc
tcctcgaggatgcctcagtggcacggccggcagccgtccagccccagggtagcagagctg
cctgacgcagatagtgaagaggatgaagatgaacaagtatcagcagtttaa

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