Molothrus aeneus (bronzed cowbird): 136571215
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Entry
136571215 CDS
T11621
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
maen Molothrus aeneus (bronzed cowbird)
Pathway
maen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
maen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
136571215 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maen03400
]
136571215 (LIG4)
Enzymes [BR:
maen01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
136571215 (LIG4)
DNA repair and recombination proteins [BR:
maen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
136571215 (LIG4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
136571215
NCBI-ProteinID:
XP_066427646
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All DBs
Position
2:complement(81906298..81910499)
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AA seq
912 aa
AA seq
DB search
MASTPVSQPPPKKTVASHVPFADLCSTLERIQKSKTRPEKTKYFKDFLDSWRKFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLSLPKDGKDAAKLLNYRTP
TGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGQLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPTVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMSNQTFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFKSNIQNCILDGEMMAYNPEAQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTPVKGRIHVVHKRSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAETPAPNEKPTIFHSICRVGSGYTMKELYDLGLKLAKHWKPYNRKDPP
GNILCGAEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAQGKLASKHLHIDEYDEPHEKKRKTVSKVRKVIGIAEQFKAPDLSSVSKV
SNVFEDVEFCVMTGMGKYSKSDLESRIAQCGGSVVQNPGPETYCVIVGAENVRVKNVIAS
NKYDVVRAEWLLQCFETKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTANTDVVQLK
EVFSRMKDNKAMPLDLIAELEERYWCGSCQLSIFRGSTVYVDCYAVVNEPQSKIPGTTLS
VRALELRFYGAEVVSHLEEGVSHVVVGEDCSRVEEMKALRRTFGKKFKIVSELWVTHSVE
EGVAKNENQYLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacacctgtttcacagcctcctcctaaaaaaacggtggcctctcacgtgcct
tttgcagatctctgttctactctggagcgaatacagaagtccaaaactcgtccagagaaa
acgaagtatttcaaggattttctggattcctggaggaaattccatgatgcactccatcaa
aaagagaaagatgtcacagattccttttacccagctatgcggctcattctcccacagttg
gaaagagaaaggatggcatatgggattaaagaaactatgctcgcaaagctctatattgaa
ctgcttagtttaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacgcct
acgggctcacgtggagatgctggggattttgcaatgatcgcctactttgtgctaaagcct
aggagcccaaaacaaggcagactgacaatagaacaagttaatgaacatttagatgcaatt
gctaataataatgctgctaaaaacaagggtcagttaaagaaaagtcttctgcagttaatt
acccagagcacagcactggaacaaaagtggcttatccgaatgattataaaggatctaaag
cttggtgttagtcaacaaactatattttcaatttttcatcctgatgctgctgaattgcac
aatgtcactactgacttggaaaaagtttgcagacagctgcatgatcccactgtctcactt
agtgatgtttctatcatgttgttttctgcctttaaaccaatgcttgctgctattgcagat
gtccagcaaattgagaaacaaatgagtaaccagacattctacatagaaacgaagctggat
ggtgaacgtatgcagatgcacaaagatggggatgtgtacaagtacttttcccgaaatggg
tttgactatacccagcagtttggtgcttcaccccttgaaggttcattaacgccatttatt
cataatgtatttaagagcaatatacaaaattgcattcttgatggtgaaatgatggcttac
aatcctgaggcacagacttttatgcaaaaaggaaacaaatttgacataaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtatttgatgtattgatggttaatgatcag
aagttggggcatgaagtactaagcaaaagatatgaaatcttaagtagtgtatttactccg
gtaaagggcaggatacatgtggtccataagagaagtgccagaacaagaaaagaagtaatt
gatgctttaaatgaagccatagataacagagaggaaggaattatggtgaaagatcccatg
tccacctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtc
aatggactgatggatgagctggaccttttaattgttggtggttactgggggaaggggtct
cgtggtggaatgatgtctcattttctatgtgctgttgcagagacacccgctccgaatgaa
aagccgaccattttccactccatttgtcgtgttggctctggctatactatgaaagagttg
tatgatctaggcttgaaactggctaaacactggaagccctacaataggaaggaccctcct
ggtaacattttgtgtggagctgaaaaacctgaaatgtacattgaaccttgcaactctgtc
atagttcagatcaaggcagctgagattgttgacagtgatatgtataaaactgactgtact
ttgagattcccccgaattgagaagataagggaagacaaagaatggtatgagtgcatgact
tcagacatgctagaagacctcagaagcaaagcacaagggaagctggcatctaagcacctt
catatagatgagtacgatgagccacatgagaaaaaaaggaaaactgtttcaaaggtgagg
aaggtaattggaatagctgagcaatttaaagctcctgatctttctagtgtaagcaaggtt
tcaaatgtatttgaagatgttgagttttgtgtaatgacaggaatgggaaaatactcaaag
tctgacctggaaagcagaatagcccaatgtggtggcagtgtggtacagaacccagggccg
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacgtcatcgcttcc
aacaaatatgatgtggtgagggcagagtggctccttcagtgttttgaaaccaaaatgctg
gtgccttggcaaccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacacagcaaacacagatgttgtgcagctcaag
gaagtgttctcaagaatgaaagacaataaggcaatgcctctggacttgattgcagagcta
gaagaacgttattggtgtggcagttgtcagctcagtatattcagaggaagcactgtttat
gtggactgttatgctgttgttaatgagccccaaagtaaaatccctggaactacactttca
gttagagctttggagctccgtttttatggtgcagaagtagtttctcaccttgaagagggt
gtctcccatgttgttgtgggagaagattgttcacgggtagaagagatgaaagcactcagg
agaacatttgggaaaaaatttaaaattgtatccgagctatgggtaacacactcagtggag
gaaggagttgcaaagaatgaaaatcagtacttaatttaa
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