Magnetospirillum sp. XM-1: XM1_0423
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Entry
XM1_0423 CDS
T04231
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XM1_0423 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_0423 (nth)
Enzymes [BR:
magx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XM1_0423 (nth)
DNA repair and recombination proteins [BR:
magx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XM1_0423 (nth)
Prokaryotic type
XM1_0423 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CUW37492
LinkDB
All DBs
Position
I:complement(413977..414612)
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AA seq
211 aa
AA seq
DB search
MTPKQADRFYALLAERNPDPKSDLEYSDPYTLLVAVVLSAQATDAGVNKATRPLFAKVNT
PQAMVALGEEGLAEAIRTIGLYKTKAKNVIELSRRLLNLHGGRVPHDREALEALPGVGRK
TANVVLNIAFNEPTIAVDTHCFRVANRTGLAPGKTVEAVEQGLMKATPAKWLQHAHHWLI
LHGRYVCKARKPDCPSCVVRDLCAFEGKDAL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccaagcaggccgaccgcttctacgcccttttggccgagcgcaatcccgatccc
aagagcgatctggaatattccgatccctacaccctgctggtggcggtggtgctgtccgcc
caggccaccgacgcgggcgtcaacaaggcgacgcggccgctgttcgccaaggtgaatacc
ccccaggccatggtggcactgggcgaggaagggctggccgaagccatccgcaccatcggc
ctctacaagaccaaggcgaagaacgtcatcgaactgtcgcgccggctgctgaacctgcat
ggcggccgggttccccatgaccgcgaggcgctggaggcgctgcccggcgtggggcgcaag
accgccaacgtggtgctcaacatcgccttcaatgagcccaccatcgcggtggacacccat
tgcttccgcgtcgccaaccgcaccggtctggcgccgggtaagacggtcgaggcggtggag
cagggattgatgaaggcgacgccggccaagtggctgcagcatgcccaccactggctgatc
ctgcacggccgctacgtctgcaaggccaggaagcccgactgcccgtcctgcgtggtgcgc
gatctgtgtgccttcgagggcaaggacgccctttag
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