Magnetospirillum sp. XM-1: XM1_3146
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Entry
XM1_3146 CDS
T04231
Symbol
ispDF
Name
(GenBank) Bifunctional enzyme IspD/IspF [Includes: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase]
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00900
Terpenoid backbone biosynthesis
magx01100
Metabolic pathways
magx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
XM1_3146 (ispDF)
Enzymes [BR:
magx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
XM1_3146 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
XM1_3146 (ispDF)
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Motif
Pfam:
YgbB
IspD
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
CUW40207
UniProt:
A0A0U5MEX3
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Position
I:complement(3121348..3122502)
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AA seq
384 aa
AA seq
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MAKTVVLVVAAGRGRRFGGDLPKQYHDLAGRMVLRHTLAAFATNPEIGAVRAVIHPDDRQ
LYDMAAAGLNLLEPVHGGETRQDSVRLGLDSLKDLNPAKVLIHDGARPFVDHGTIGRVIR
ALDRHPGALPVMPVVDTLKKGLDGFVADTVDRSALFRAQTPQGFRYAEILAAHHAVIGNE
LTDDAAVAEMAGLAVELVAGSEDNVKITSAADLERARRLFDGAGEVRSASGYDVHRFDPA
KKSVWLCGIEVPHEAGLEGHSDADVALHALTDAVLGAIAAGDIGHHFPPTDPKWKGAASD
QFLAHAGSLVTAKGGRIVNVDITIICERPKVGPHRAAMVAKVAEILGISQDRVSVKATTT
EGLGFTGRKEGIAAQAMASVWLPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacggttgtgctggtggtggcggcggggcgcgggcggcggttcggcggcgac
ctgcccaagcaataccacgacctggccgggcgcatggtgctgcgccacaccctggcggcc
ttcgccaccaatcccgaaatcggcgcggtgcgtgccgtcatccatcccgacgaccgccag
ctctacgacatggccgccgccggcctcaacctgctggaacccgtgcatggcggcgagacc
cgccaggacagcgtgcgcctcggcctggacagcctgaaggacctcaacccggccaaggtg
ctgatccatgacggcgcgcgccccttcgtcgatcacggtaccatcggccgggtgatccgg
gcgctggaccgccatcccggcgccctgccggtgatgccggtggtcgataccctgaagaag
ggcctggacggcttcgtcgccgacaccgtcgaccgctcggccctgttccgcgcccagacc
ccccagggcttccgctatgccgagatccttgccgcccatcacgcggtcatcggcaatgag
ctcaccgacgacgccgccgtggcggaaatggctgggctggcggtggaactggtggcgggt
tcggaggacaacgtcaagatcacctcggccgccgacctggagcgggcgcggcgcctgttc
gacggcgccggcgaggtgcgctcggcctcgggctacgacgtccaccgtttcgacccggcc
aagaagtccgtctggctgtgcggcatcgaggtgccccacgaagccggcctggaaggccat
tccgacgccgacgtggcgctgcacgcgctcaccgacgcggtgctgggcgccatcgccgcc
ggcgacatcggccaccacttcccgcccaccgatcccaagtggaagggcgccgcctcggac
cagttcctggcccatgccggctcgctggtcaccgccaagggcgggcgcatcgtcaacgtg
gacatcaccatcatctgcgagcgccccaaggtggggccgcatcgggccgccatggtagcg
aaagtggcggaaattctgggcatctcccaggaccgggtcagcgtcaaggccaccaccacc
gaaggcctgggcttcaccggccgcaaggagggaatcgccgcccaggccatggcctcggtc
tggctgccacgctag
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