Mycolicibacterium aichiense: MAIC_17430
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Entry
MAIC_17430 CDS
T06903
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
maic
Mycolicibacterium aichiense
Pathway
maic03030
DNA replication
maic03410
Base excision repair
maic03420
Nucleotide excision repair
maic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAIC_17430 (ligA)
03410 Base excision repair
MAIC_17430 (ligA)
03420 Nucleotide excision repair
MAIC_17430 (ligA)
03430 Mismatch repair
MAIC_17430 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maic03032
]
MAIC_17430 (ligA)
03400 DNA repair and recombination proteins [BR:
maic03400
]
MAIC_17430 (ligA)
Enzymes [BR:
maic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MAIC_17430 (ligA)
DNA replication proteins [BR:
maic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MAIC_17430 (ligA)
DNA repair and recombination proteins [BR:
maic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MAIC_17430 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAIC_17430 (ligA)
MMR (mismatch excision repair)
DNA ligase
MAIC_17430 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MAIC_17430 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
Auto_anti-p27
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
BBX06940
UniProt:
A0AAD1HK89
LinkDB
All DBs
Position
1789223..1791346
Genome browser
AA seq
707 aa
AA seq
DB search
MAAETSDPEVDPIDPDVRRRWQELAEEVREHQFRYYIKDAPIVSDAEFDRLFNELLALED
RFPELRVADSPTQLVGGAGFATDFAEAAHLDRMLSLDDVFNTEELAAWSSRVEAEIGRDP
QYLCELKIDGVAIALVYRDGRLERAATRGDGRVGEDVTNNARTIDDIPETLTASEDYPVP
ALLEVRGEVFFMLADFENLNASLVEEGKAPFANPRNSAAGSLRQKNPAVTARRRLRMICH
GLGRAEFSAGYAPSSLHDTYFALKAWGLPVSDHTTRVAGLAAVEEKIVYWGERRHEIEHE
IDGVVVKVDDFAQQRRLGATSRAPRWACAYKYPPEEAQTKLLDIQVNVGRTGRVTPFAMM
TPVKIAGSTVGMATLHNGSEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGTEREFV
MPTHCPECGTPLAPAKEGDVDIRCPNSRSCPAQLRERVFHLAGRGGLDIEGLGYEAATAL
LAAKVITDEGDLFSLTSADLLTSDFFTTKDGTLSANGARFLINLQQAKDRPLWRILVALS
IRHVGPTAARALAVAFGSLDAIMAASEEQLADVEGVGPTIAAALVEWFAVDWHRAIIDKW
RAAGVRMEDVRDESISPTLQGLSIVVTGSLPNFSRDEAKEAIISRGGKAVGSVSKKTSYV
VAGDSPGSKYDKAVELGIPILDEDGFRALLDEGPPAAEPEDPDDSPA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcagagacgtccgatcccgaggttgatcccatcgatccggatgtgcggcggcgt
tggcaggaacttgccgaagaggtgcgcgagcatcagttccgctactacatcaaggacgcg
ccgatcgtctccgacgcggagttcgacaggctcttcaacgagctcctcgcgctcgaggat
cgttttcccgagcttcgggtggccgactcgccgacccagctggtcggcggcgcgggcttc
gccaccgacttcgccgaggccgcccacctggaccgcatgctgagcctcgacgacgtgttc
aacaccgaggaactggcagcctggtccagccgggtcgaagccgagatcggccgggatccg
caatacctgtgcgagctgaagatcgacggcgtcgcgatcgctttggtgtaccgcgacggc
cgattggagcgggccgccacccgcggtgacggccgggtcggcgaggacgtgaccaacaat
gcccgcaccatcgacgacattcccgaaactctcactgcgtcagaggattacccggttccg
gcgctactcgaggtgcgcggcgaggtgttcttcatgctggcggatttcgagaacctgaac
gccagcctggtcgaggagggcaaggcgccgttcgccaacccgcgtaacagcgcggccggc
tcgctgcggcagaagaatccggcggtaaccgcccgccgtcggctgcggatgatctgccac
ggcctgggccgcgcggagttttccgcaggctatgccccttcctccctgcacgacacctac
ttcgcgctgaaggcctggggcctgcccgtctccgatcacaccactcgggtggcggggctg
gccgccgtcgaggagaagatcgtctactggggcgaacgccgccacgagatcgagcacgaa
atcgacggcgtggtggtcaaagtcgacgacttcgctcagcagcgccggctcggcgccacc
tcccgcgcgccgcgctgggcatgcgcctacaagtacccgccggaagaagcccagaccaag
ctgctcgacatccaggtcaatgtcggtcgcaccggccgggtcaccccgttcgcgatgatg
acgccggtgaagatcgccgggtcgacggtcggcatggccaccctgcacaacggctcggag
gtcaagcgcaagggcgtgctgatcggtgacaccgtgatgatccgcaaagccggcgacgtc
atccccgaggtcctggggcccgtcgtcgacctccgcgacggcaccgagcgcgaattcgtg
atgcccacccattgcccggagtgcggcaccccgctggcgccggccaaggagggcgacgtc
gacatccggtgcccgaactcccgatcctgccccgctcaactgcgtgagcgggtctttcac
ctggccggtcgcggtgggctggacatcgaggggctgggctacgaggcggcgaccgcgctg
ctggccgccaaggtcatcaccgatgagggcgacctgttcagcctcaccagcgccgacctg
ctgacgtcggacttcttcaccaccaaggacggcacgctgtccgccaacggcgcccggttc
ttgatcaacctgcagcaggccaaggaccggccgttgtggcggatcctggtcgcgttgtct
atccgccacgtcgggccgaccgcggcgcgggcgctggccgtggcgttcggcagcctcgac
gcgatcatggccgccagcgaggagcagctcgccgacgtcgaaggggtcggaccgacgatc
gccgcagcgctggtcgaatggttcgccgtcgactggcaccgcgcgatcatcgacaagtgg
cgggcggccggcgtgcggatggaagacgtccgcgatgagtcgatcagccctacgctgcaa
ggactttcgatcgtggtcaccgggtcgttgccgaacttctcccgcgacgaggccaaggag
gccatcatcagccgtggcggcaaggcggtcggctcggtgtcgaagaagacctcgtatgtg
gtcgcgggcgattcgcccggatcgaagtacgacaaggccgtcgaactgggtatcccgatc
ctcgacgaggacgggttccgcgccctgctggacgagggaccgccagcggctgagcccgag
gaccctgacgacagtcctgcgtga
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