Monopterus albus (swamp eel): 109954944
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Entry
109954944 CDS
T05607
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109954944 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
malb03041
]
109954944 (eftud2)
Spliceosome [BR:
malb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109954944 (eftud2)
Complex C
U5 SnRNP specific factors
109954944 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
109954944
NCBI-ProteinID:
XP_020446290
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLEAEDREVDEGDEDEDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLMEQELPATVYDMEFLAD
LMDGPALIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVISSVRISDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYADTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKMNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGARTKIEHTYAGGLDSDLGEAMAECDPDGPLMCHTTKM
YNTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTSTITEPRGNEEVRLFLPRLKFNTASVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DEPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgatgagtttggcaactacatcggtccagagctggactctgac
gatgatgaagatgatctggaagcagaggacagagaagttgatgagggtgatgaagatgag
gatgatgagcctgctgatgctgatgatgatgtcccgggcatggaggtggtcctgcatgag
gacaaaaagtactatcctacagcagaagaggtttatgggcctgaagtggaaactattgtc
caggaggaagatacacaacctcttacagagcccatcattaagcctgtgaagaacaagcag
ttcaccttgatggagcaggagttacccgccactgtctacgatatggaattcctggcagat
ctgatggatggtccagcgctgattcgtaatgtcaccctatgtggtcaccttcaccatggc
aagacctgttttgtggactgcctgattgagcagactcacccagaaatcagaaagagagat
gatgtggatctccggtacacagacattctctttacagaacaggagagaggagttggtatc
aagagtactcctgtcacaatggtcctgccagactccagaggcaaatcctaccttttcaat
atcatggatacaccaggccatgtaaacttctctgacgaggtcatatctagtgtccggatt
tcagacggcattgtcctcttcattgacgcagcagaaggagtgatgctgaacacagagcga
ctgatcaaacatgcagttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcatcgtggagctcaaactgcctcccacagatgcttattataaacttcgccacatt
gtggatgaggttaatggtttgctcagcacatactccacagatgagaatttggtggtgtca
cctctccttggaaacgtctgcttcgccagttcgcagtacagcatctgtttcaccctgggg
tcttttgcaaagatctacgcagatacctacggtgacatcaactataatgagtttgccaaa
aggctttggggagacatttatttcaaccctaaaactcgcaagttcacaaagaaagctccc
agcagtaactctcagcgcagctttgttgaatttgtcctggagcctctctacaagatcctc
tcacaggttgttggggatgtggacacgtctctcccccgagttctggatgagctggggatc
cacctgactaaagaggagctaaagatgaacattagacccctactgagactggtctgcaac
cgcttctttggagaattcactggttttgtggacatgtgtgtacaacacatcccctcacca
caagagggcgctcggaccaagatagagcacacctatgcaggaggtctggactcggacctg
ggggaggccatggcagagtgtgaccctgatggccctttgatgtgccacaccactaagatg
tacaacacagaggacggagttcagttccatgcatttggcagggtgctgagtggcaccatc
caggcaggccagcccgtcaaggttttaggagagaactacacccttgaagatgaggaggac
tcacaggtttgcactgtgggccgtctctggatttctgttgccagataccaaattgaagtg
aaccgagtccccgctggcaactgggtcctcatcgaaggctgtgaccagccgatcgtcaag
acttccacaatcacagagcccagaggcaatgaagaggtcagactttttcttcccaggttg
aaattcaacacagcgtcagttatcaagattgcagtggagcccgtcaacccatcggagctg
cctaaaatgttggacggactgaggaaggtcaacaagagctatccttctctaaccacaaag
gtggaggagtctggagagcatgttatcttaggcacaggagagctctacttggactgtgtc
atgcacgacctgcgcaagatgtactctgagatcgacattaaggttgccgacccagttgtg
actttttgtgaaacagttgttgagacatcatctctcaagtgctttgctgaaacaccaaac
aaaaagaataagattaccatgatagctgagcctttggagaaggggctggctgaggacata
gagaacgaagtggtgcagatcacatggaacaggaagaagctgggggagtttttccagaca
aagtacgactgggatctgctggctgccaggtctatctgggcctttggaccagacacaacg
ggaccaaacattcttgtagatgatacgctgccttctgaggtggacaaggcgctgctcggc
tcggtcaaagacagcattgttcagggcttccagtggggcaccagggaggggcctctgtgt
gatgagcccattagaaatgtgaaatttaagatcctggatgccgtcatcgctcaggagcct
ctccacagaggaggaggccaggtcatccccacagccaggagagtggtgtactctgctttc
ctcatggccacgccaaggttgatggagccatactactttgtggaggttcaggctccagct
gattgtgtatctgctgtctacacagtgctggctcgaagaaggggtcatgtcacccaggat
gcgcctattccagggtcaccgctctacaccattaaggctttcatcccagccattgactcc
tttggctttgagacagacctccgcacacatacacaagggcaggcctttgccctgtctgtg
ttccatcactggcagattgttcctggtgaccccttagacaagagtatcgtgatcaggccc
cttgagcctcagcctgccccccatctggccagagagttcatgatcaagacccgaaggcgt
aagggtctaagcgaagatgtgagtatcagcaagttcttcgacgatcccatgttgttggag
ctggccaaacaggacgtggtgcttaactaccccatgtga
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integrated database retrieval system
