KEGG   Marinovum algicola: MALG_01346
Entry
MALG_01346        CDS       T03981                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
malg  Marinovum algicola
Pathway
malg03030  DNA replication
malg03410  Base excision repair
malg03420  Nucleotide excision repair
malg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:malg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MALG_01346
   03410 Base excision repair
    MALG_01346
   03420 Nucleotide excision repair
    MALG_01346
   03430 Mismatch repair
    MALG_01346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:malg03032]
    MALG_01346
   03400 DNA repair and recombination proteins [BR:malg03400]
    MALG_01346
Enzymes [BR:malg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     MALG_01346
DNA replication proteins [BR:malg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MALG_01346
DNA repair and recombination proteins [BR:malg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     MALG_01346
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MALG_01346
   MMR (mismatch excision repair)
    DNA ligase
     MALG_01346
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MALG_01346
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT DNA_ligase_ZBD HHH_2 PTCB-BRCT 5_3_exonuc Nlig-Ia
Other DBs
NCBI-ProteinID: AKO96531
LinkDB
Position
1379994..1382111
AA seq 705 aa
MAREIAVSELTEDQAREELAALAEALTAANLAYHGADAPEITDADYDALKRRNAEIETRF
PELKRADSPSDQVGAAPAEGFAKVRHQVRMMSLGNAFDDADVLEFDASIRRYLNWPANAQ
LAYTAEPKIDGLSLSLRYENGKLITAATRGDGETGENVTANARTIDTIPEVLTGAPEVLE
VRGEVYMRHADFEALNKRQVERGGKTFANPRNAAAGSLRQLDPEITRDRPLAFFAYSWGV
LSDPLAETQSGAIERLAELGFQTNALTRRCDTPAEMIALYREIEEQRATLGYDIDGVVYK
IDRLDLQERLGFRSTTPRWAIAHKFPAELAWTRLEAIDIQVGRTGALSPVARLTPVTVGG
VVVSNATLHNEDYIAGRDSRGGEIRGGKDIRIGDWVQIYRAGDVIPKVADVDLSKRPEDT
APYVFPETCPECGSEAVREEGDAVRRCTGGLICPAQQIEKLKHFVSRSAFDIDGLGAKQV
EQFYRDGWIAEPADIFTLRARYGQGMQQLKNRDGWGAKSAQKLFDAIDERRKIALGRVIF
GLGIRHVGEQSANLLASHYGAWATFDRAMTEAQPMEGPAWDELLGVDGVGQVMAASLVAA
FGQEAERAAIDRLVAQLDIQDAARPAVEGSPVAGMTIVFTGSLEKMTRAEAKARAEALGA
KVSGSVSKKTDLVVAGPGAGSKGKKAAELGIDMLDEDGWLALIGA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggcgcgcgagattgcagtttccgaattgaccgaagatcaggcgcgcgaggaactcgcg
gcgctggccgaggcgctgactgcggccaatctggcctatcacggcgccgatgcgccggag
attaccgacgccgattacgatgcgctcaaacgccgcaacgccgagatcgagacgcgattc
ccggaattgaaacgggccgacagcccctctgatcaggtcggtgccgccccggccgaaggc
tttgccaaggtccgccaccaggtgcggatgatgagcctcggcaatgccttcgacgatgcc
gatgtgctggaattcgacgccagcatccgccgctatctgaactggcccgccaatgcgcag
ctggcctataccgccgaacccaagatcgacggcctctcgctctcgctgcgctatgaaaac
ggcaagctcatcactgccgccacccgaggcgatggcgagacgggcgagaatgtcaccgcc
aatgcccgcaccatcgacaccatccccgaggtgctcaccggcgcgcccgaggtgctcgag
gtgcgcggcgaggtgtacatgcgccacgccgatttcgaggcgctcaacaagcgccaggtc
gaacgcggcggcaagaccttcgccaatccgcgcaatgccgccgccggctcgctgcgtcag
ctcgaccccgagatcacccgcgaccggccgctggcctttttcgcctacagctggggcgtg
ctctcggacccgctggccgaaacgcaatcgggcgccatcgaaaggctggcggagctgggg
tttcagaccaatgcgctcacccgccgctgcgacaccccggcagagatgatcgccctctac
cgcgagatcgaggaacagcgcgcgacgctgggctacgacatcgacggtgtggtctacaag
atcgaccggctcgacctgcaagagcggctggggttccgctcgaccacgccgcgctgggcc
atcgcgcataaattccctgccgaactggcctggacgcggctcgaggcgatcgacatccag
gtcggtcgtaccggcgcgctcagcccggtggcgcggctgacgccggtaacggtgggcggt
gtcgtcgtctccaacgcgacgctgcacaacgaggattacatcgccgggcgcgacagccgc
ggcggcgaaatccgcggcggcaaggacatccggatcggcgactgggtgcaaatctatcgc
gccggcgacgtgatccccaaggtggccgatgtcgacctgtccaaacgccccgaggacacc
gccccctatgtctttccggagacgtgcccggaatgcggatcggaggccgtgcgcgaagaa
ggcgacgccgtgcgccgttgtaccggcgggttgatctgcccggcgcaacagattgaaaag
ctgaagcatttcgtctctcgctcggcattcgacatcgacggtctcggcgccaaacaggtc
gagcaattctatcgcgacggctggatcgcggagccggccgatatcttcaccctgcgcgca
cgttatggccagggcatgcagcagctgaaaaatcgcgacggctggggcgcgaaatcggcg
cagaagctgttcgatgccatcgacgagcggcgcaagattgcgctgggccgggtgatcttc
ggccttggcatccgccatgtcggcgaacaatcggccaatctcctggccagccattatggc
gcctgggccacctttgaccgcgcgatgaccgaggcgcagccgatggagggcccggcctgg
gacgaactgctcggcgtcgatggcgtgggccaggtcatggctgcctcgctggtcgccgcc
ttcgggcaagaggccgagcgcgcggcaatcgacaggctggtggcgcagcttgatatccag
gacgcggccagacccgcggtcgagggcagcccggtggccggcatgaccatcgtctttacc
ggcagcctcgaaaagatgacccgcgccgaggccaaggcccgggccgaggccctgggcgcc
aaggtctcggggtcggtgtcgaaaaagaccgatctggtggtcgccgggccgggggccgga
tcgaagggcaagaaagccgccgaactggggatcgacatgctcgacgaagacgggtggctg
gccctgatcggcgcatga

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