Pseudoduganella albidiflava: EYF70_20280
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Entry
EYF70_20280 CDS
T05903
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mali
Pseudoduganella albidiflava
Pathway
mali01501
beta-Lactam resistance
mali01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EYF70_20280
01503 Cationic antimicrobial peptide (CAMP) resistance
EYF70_20280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mali03036
]
EYF70_20280
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mali02000
]
EYF70_20280
01504 Antimicrobial resistance genes [BR:
mali01504
]
EYF70_20280
Chromosome and associated proteins [BR:
mali03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EYF70_20280
Transporters [BR:
mali02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EYF70_20280
Antimicrobial resistance genes [BR:
mali01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EYF70_20280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_CzcB
Beta-barrel_RND_2
BSH_RND
RND-MFP_C
Biotin_lipoyl
BSH_CusB
OEP
HH_EMRA
Beta-barrel_YknX
BSH_LcnD
HH_MFP_RND
FOG1-like_PR
CzcB_C
DUF4715
BSH_YknX
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QBI02923
UniProt:
A0A411X1T3
LinkDB
All DBs
Position
complement(4896864..4898009)
Genome browser
AA seq
381 aa
AA seq
DB search
MLRNTLIALAVATSLVACGKPPGADGAAKGEEKKTARLLVAPEDLLTVHSNALASGPVIT
GSIQPERRADLRAEVSAIVLQVLKENGEPVKKGDLLVRLDDTSIRDSLSSSEEGVRNAKQ
VVDQAQRMLERNKTLRASGMTSLQALEDAEVRLNTAQSELAAAKARAVQARQQLDRTLVR
APFDGIVSERKVSSGDTAQIGKELIKVIDPNSMRFEGLVSADKIGVVKVGQPVLFRVNGY
PGQNFQGKIRRVDPAANAVTRQVEVLVDFAGASQPRVAGLYAEGRVESETSDTLMVPESA
MVQAGDDRYVWRVKDNKLAKVILAIGSRDERTGQWQVTKGLAAGDTVLRAPGSTVQDGQP
VQLTAPKNVASASGNAANKGN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgaaataccttgatcgctctcgccgtcgccacgagcctcgtcgcctgcggaaaa
ccacccggtgccgatggggccgcgaaaggggaggaaaagaagacagccaggctgctggtc
gcaccggaagatctgctgaccgtgcacagcaacgcgctggcttccggccccgtgattacc
ggctcgatccagccggaacgccgcgccgacctgcgcgccgaagtgtcggccatcgtgctc
caggtcctcaaggaaaatggcgaacccgtgaagaagggcgacctgctggtcaggctggac
gatacgtcgatccgcgacagcctgtcgtccagcgaagagggcgttcgcaacgccaagcag
gtggtcgaccaggcccagcgcatgctggagcgtaacaagacgctgcgggcctccggcatg
acgtcgctgcaggcgctggaagatgccgaggtgcgcctgaataccgcgcaaagcgaactg
gccgctgccaaagcgcgggccgtgcaggcccgccagcagctggaccgcacgctggtgcgc
gcgccgttcgatggcatcgtcagcgagcgcaaggtgtcgagcggcgataccgcgcagatc
ggcaaggaactgatcaaggtgatcgacccgaacagcatgcgcttcgaaggcctggtgtcg
gccgacaagatcggcgtcgtcaaggtgggccagccggtgctgttccgtgtcaatggctat
ccgggccagaatttccagggcaagatccggcgcgtggatcccgctgcaaacgctgtcacg
cgccaggtcgaggtgctggtcgacttcgccggcgcgtcgcagccgcgcgtggccggcctg
tatgcggagggccgcgtcgagagtgaaacgtcggatacgctgatggtgccggaatcggca
atggtgcaggccggcgacgaccgctacgtgtggcgggtgaaggacaacaagctggccaag
gtgatcctggcgatcggctcgcgcgacgagcgcaccgggcagtggcaagtcaccaagggc
ctggcggccggcgacacggtgctgcgcgcacccggctcgaccgtgcaggatggccagccg
gtgcagctgaccgcgccgaagaacgtcgcctccgccagcggcaatgccgccaacaaaggc
aactga
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