Pseudoduganella albidiflava: EYF70_23075
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Entry
EYF70_23075 CDS
T05903
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EYF70_23075 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mali03400
]
EYF70_23075 (nth)
Enzymes [BR:
mali01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EYF70_23075 (nth)
DNA repair and recombination proteins [BR:
mali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EYF70_23075 (nth)
Prokaryotic type
EYF70_23075 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QBI03384
LinkDB
All DBs
Position
5573988..5574635
Genome browser
AA seq
215 aa
AA seq
DB search
MNAAKRHEIFRRLREATPHPTTELEYTTPFELLIAVLLSAQATDVGVNKATRKLYPVANT
PQAILDLGLDGLVPYIQTIGLFNTKAKNVMATCKILVEQHGGEVPRDREALEALPGVGRK
TANVVLNTAFGEPTIAVDTHIFRVANRTNLAPGKTVDIVEQKLLKFVPKEFLQDAHHWLI
LHGRYTCVARKPQCWNCMIVDLCEYKPKTAAPAVV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagccaaacgccacgaaatctttcgccgcctgcgcgaagccaccccccacccc
accaccgagctcgaatacacgaccccgttcgaactgctgatcgccgtgctgctgtcggcg
caggcgacggacgtgggcgtcaacaaggcgacccgcaagctgtacccggtggcgaacacg
ccgcaggcgatcctcgacctgggcctcgacggactggtgccgtacatccagaccatcggc
ctgttcaacaccaaggccaagaacgtgatggccacctgcaagatcctcgtcgagcagcat
ggcggcgaggtgccgcgcgaccgcgaggcgctggaggcgctgcccggcgtgggccgcaag
accgccaacgtggtgctgaacaccgcgttcggcgagccgacgatcgccgtcgacacgcac
atcttccgggtagcgaaccgcaccaatctcgcgccgggcaagacagtggacatcgtcgag
cagaagctgctgaagttcgtgccgaaggaatttttgcaggatgcccaccactggctgatc
ctgcatggccgctacacgtgcgtggcgcgcaagccgcagtgctggaattgcatgatcgtg
gatctgtgcgagtacaagccgaagacggcggcaccggcggtggtttga
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