Pseudoduganella albidiflava: EYF70_24590
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Entry
EYF70_24590 CDS
T05903
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali00270
Cysteine and methionine metabolism
mali00450
Selenocompound metabolism
mali00670
One carbon pool by folate
mali01100
Metabolic pathways
mali01110
Biosynthesis of secondary metabolites
mali01230
Biosynthesis of amino acids
mali04980
Cobalamin transport and metabolism
mali04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
EYF70_24590 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
EYF70_24590 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EYF70_24590 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EYF70_24590 (metH)
04980 Cobalamin transport and metabolism
EYF70_24590 (metH)
Enzymes [BR:
mali01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
EYF70_24590 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
TadB_TadC_N
Motif
Other DBs
NCBI-ProteinID:
QBI03655
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Position
5911937..5915707
Genome browser
AA seq
1256 aa
AA seq
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MNQPANRPASQTEAQLRDILSRRIMFLDGAMGTIIQQYKLDEAAYRGERFADFAAPAGSG
ARELFVKGNNELLNLTQPHVIQEIHERYLAAGADLIETNTFGATGIAQDDYHMAHLVYEM
NLQAAKLARAAVDKYSTPDKPRFVAGALGPTPKTASISPDVNDPAARNITFDQLVTSYYE
QLDALVEGGIDVVLVETIFDTLNCKAALFAIDQYFDDHPEQERLPLMISGTVTDASGRIL
SGQTVPAFWNSVRHAKPLTIGLNCALGAALMRPYAEELSQIADTFVCIYPNAGLPNPMSD
TGFDELPADTSALLREFAEAGFINMAGGCCGTTPDHIAAIVALLKDMTPRALPRIPVAQR
LSGLEPFTIDDDSLFVNVGERTNVTGSKAFARMILNEQYDEALSVARQQVENGAQVIDIN
MDEAMLDSQAAMTRFLNLIASEPDISRVPIMIDSSKWSVIEAGLKCVQGKSIVNSISMKE
GEAEFIRQARLCRRYGAAVIVMAFDETGQADTFERKIEICERAYKVLTEKVGFPAEDIIF
DPNIFAVATGIEEHNNYAVDFINATRWIKDNLPHAKISGGVSNVSFSFRGNDPAREAIHT
VFLYHAIKAGMTMGIVNAGMVGVYDDLPAELRERVEDVVLNRRPDATERMIEFAGTLKAG
GKQQEANLEWREGPVEKRLAHALVHGITQWITEDTEEMRLQVLNGGGRPINVIEGPLMDG
MNIVGDLFGQGKMFLPQVVKSARVMKQAVAHLIPYIEEEKLAEEKRTGIVAKPKGKIVIA
TVKGDVHDIGKNIVSVVLQCNNFEVVNMGVMVPASEILARAKVENADIIGLSGLITPSLE
EMAHVAKEMQRDEHFRMLKIPLLIGGATTSRAHTAVKIAHNYDGPVVYVPDASRSVSVAQ
SLLTPDARDRYVEELETDYARIREQHANKKALPTVTLAAARANKAKLQFAPVKPKFVGRR
LFRNVDLALLAQYIDWGPFFQTWDLAGPFPAILTDEVVGEAATKVFEEGQALLKRIIEGR
WLTANGTVALLPANSVNDDDIEVYTDDTRSEVAFTYYGLRQQGVKPVIDGVQRPNQCLAD
FIAPKVSGVKDYLGMFAVTAGLGIEKYEKRFEDAHDDYSSIMLKALADRLAEAFAEYLHE
RVRKDLWGYAADERLTNEQMIREEYAGIRPAPGYPACPEHTVKADLFRVTGAEEIGMELT
ESFAMFPGAAVAGFYFAHPQSKYFTVGKINEDQLADMAQRRGVPKAQLESWLAPNL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcccgcgaaccgccccgcctcccagaccgaagcgcagctgcgcgacatcctg
tcgcgccgtatcatgttcctcgacggtgcgatgggcacgatcatccagcaatacaagctc
gatgaagcggcgtatcgcggcgaacgcttcgcggacttcgcggcaccggccggcagtggc
gcgcgcgagctgttcgtgaaggggaacaacgaattgctgaacctgacgcagccgcacgtg
atccaggagatccacgagcgctacctggcggccggggccgacctgatcgaaaccaatacc
ttcggcgccaccggcatcgcgcaggacgattaccacatggcgcatctggtctacgagatg
aacctgcaggccgcgaagctggcccgcgcggcggtggacaagtacagcacgccggacaag
ccgcgcttcgtggccggcgcgctgggcccgacgccgaagacggcatcgatctcgccggac
gtcaacgacccggcggcccgcaacatcacgttcgaccagctggtgacgtcgtattacgag
cagctcgacgcactggtcgagggcggcatcgacgtggtgctggtggagaccatcttcgat
acgctgaactgcaaggccgcgctgttcgcgatcgaccagtatttcgacgaccacccggag
caggagcgcttgccgctgatgatctcgggcaccgtcaccgacgcgtccggccgcatcctg
tccggccagaccgtgccggccttctggaattcggtgcgccacgcgaaaccgctgaccatc
ggcctgaactgcgcgctgggcgcggcgctgatgcgcccctatgccgaagaactgtcgcag
atcgccgataccttcgtgtgcatctacccgaacgccggcctgcccaacccgatgagcgac
accggcttcgacgagctgccggccgatacctcggccctgctgcgcgaattcgccgaggcg
ggcttcatcaacatggccggcggctgctgcggcaccacgccggaccatatcgccgccatc
gtcgccctgctgaaggacatgacgccgcgcgcgctgccgcgcatccccgtggcgcagcgc
ctgtccggcctggagccgttcacgatcgacgacgactcgctgttcgtcaacgtgggcgaa
cgcaccaacgtcaccggctcgaaggcgttcgcgcggatgatcctgaacgagcagtacgac
gaagccctgtccgtggcgcgccagcaggtggaaaacggcgcccaggtcatcgacatcaac
atggacgaggccatgctcgattcgcaggccgccatgacgcgcttcctgaacctgatcgct
tccgagccggacatctcgcgcgtgccgatcatgatcgactcgtcgaaatggtcggtcatc
gaggccggcctgaagtgcgtgcagggcaagtccatcgtcaactcgatctcgatgaaggaa
ggcgaggcggagttcatccgccaggcgcgcctgtgccgccgctacggcgccgcggtgatc
gtgatggccttcgatgaaacgggccaggccgataccttcgagcgcaagatcgagatctgc
gagcgggcctacaaggtgctgaccgaaaaagtgggcttcccggccgaggacatcatcttc
gatccgaacatcttcgcggtcgccaccggtatcgaggaacacaacaactacgcggtggac
ttcatcaacgccacgcgctggatcaaggacaacctgccgcacgcgaagatctcgggcggg
gtgtcgaacgtttcgttctcgttccgcggcaacgacccggcgcgcgaagcgatccacacc
gtattcctgtaccacgccatcaaggccggcatgacgatgggcatcgtcaacgcgggcatg
gtgggcgtgtacgacgacctgccggccgaactgcgcgaacgcgtggaagacgtggtgctg
aaccgccgccccgatgcgaccgagcggatgatcgaattcgccggcacgctgaaggccggc
ggcaagcagcaggaagccaacctggagtggcgcgaggggccggtggagaagcgcctggcg
cacgcgctggtgcacggcatcacgcaatggatcaccgaggataccgaggaaatgcgcctg
caggtcctcaacggcggcggccgcccgatcaacgtgatcgagggcccgctgatggatggc
atgaacatcgtcggcgacctgttcggccagggcaagatgttcctgccgcaggtggtgaag
tcggcgcgcgtgatgaagcaggccgtggcccacctgatcccctacatcgaggaagaaaag
ctggccgaggaaaagcgcaccggcatcgtcgcgaaaccgaagggcaagatcgtcatcgcc
accgtcaagggcgacgtgcacgacatcggcaagaacatcgtctcggtggtcctgcaatgc
aataacttcgaagtggtgaacatgggcgtgatggtgcccgcttccgagatcctggcgcgt
gccaaggtggagaatgccgacatcatcggcctgtccggcctgatcacgccgtcgctcgaa
gagatggcgcacgtggccaaggaaatgcagcgcgacgagcacttccgcatgctgaagatt
ccgctgctgatcggcggcgccaccaccagccgcgcccacacggcggtgaagatcgcccac
aactacgacggcccggtggtgtacgtgccggatgcctcgcgttccgtatcggtggcgcag
tcgctgctgacgccggacgcgcgcgatcgctatgtggaagaactggaaaccgactatgcg
cgcatccgcgagcagcatgccaacaagaaggcgctgccgacagtgacgctggccgccgcg
cgcgccaacaaggcaaagctccagttcgcgccagtgaagccgaagttcgtcggccgccgc
ctgttccgcaacgtcgacctggcattgctggcgcagtacatcgactggggtccgttcttc
cagacctgggacctggccggcccgttccccgcgatcctcaccgacgaagtggtcggcgag
gcggccaccaaggtcttcgaggaaggccaggcgctgctcaagcgcatcatcgagggccgc
tggctgaccgccaacggcacggtcgcgctgctgcccgccaacagcgtgaacgacgacgat
atcgaggtctacaccgacgatacgcgcagcgaagtggcgttcacctattacggcctgcgc
cagcagggcgtgaagccggtaatcgacggcgtgcagcgcccgaaccagtgcctggccgac
ttcatcgcgccgaaggtatccggcgtgaaggactacctcggcatgttcgccgtcacggcc
ggcctgggcatcgagaagtacgaaaagcgcttcgaggatgcgcacgacgattactcgtcg
atcatgctgaaggcgctggccgaccgcctggccgaagcgttcgccgaatacctgcacgag
cgcgtgcgcaaggacctgtggggctatgccgcggacgagcggctgaccaacgagcagatg
atccgcgaagagtatgccggcatccgccctgcccccggttatccggcgtgcccggagcac
acggtgaaggccgacctgttccgcgtgaccggcgccgaggagatcggcatggaattgacg
gaatcgttcgccatgttccccggcgccgccgtggcgggcttctatttcgcccatccgcaa
tcgaagtacttcacggtcgggaagatcaacgaagaccagctggccgacatggcgcagcgc
cgcggcgtgccgaaggcgcagctggaaagctggctggcgccgaacctgtaa
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