Mesorhizobium australicum: Mesau_03431
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Entry
Mesau_03431 CDS
T02417
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mam
Mesorhizobium australicum
Pathway
mam03030
DNA replication
mam03410
Base excision repair
mam03420
Nucleotide excision repair
mam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mesau_03431
03410 Base excision repair
Mesau_03431
03420 Nucleotide excision repair
Mesau_03431
03430 Mismatch repair
Mesau_03431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mam03032
]
Mesau_03431
03400 DNA repair and recombination proteins [BR:
mam03400
]
Mesau_03431
Enzymes [BR:
mam01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Mesau_03431
DNA replication proteins [BR:
mam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mesau_03431
DNA repair and recombination proteins [BR:
mam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Mesau_03431
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mesau_03431
MMR (mismatch excision repair)
DNA ligase
Mesau_03431
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mesau_03431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AGB45797
UniProt:
L0KKD8
LinkDB
All DBs
Position
3488322..3490526
Genome browser
AA seq
734 aa
AA seq
DB search
MAEKPVDSLSESEAEAELQRLAEEIAGHDRRYHAEDAPTITDAEYDALRRRNLAIEERFP
GLVREDSPSLRVGAAPAEGFTKVRHAVPMLSLAKAYTDADVTDFIERGRRFFDRDKDLDI
AFTAEPKIDGLSASLRYEKGVFVQGATRGDGAVGEDITANLRTIADIPAKLKGSGWPETI
EIRGEVYMTYAEFEALKARSAAVGGQDYVNPRNTAAGSLRQKDPSVTASRNLKFFAYAWG
YTTADPAPTQYEAVQKFADWGFKISPLMVRAKSVEELVAHYHLIEEQRSSLGYDIDGVVY
KVDQLELQRRWGFVTGEPRWAVAHKFPAEQAMTTVQRIDIQVGRTGTLAPVARLAPVTVG
GVVVENVTLHNEDYIKGLDSTGQPIRDGIDVRIGDTVVIQRAGDVIPQIVSVVIDKRPPD
AVPYEFPHSCPICGSPATREINEKTGKEDSRRRCTGELICPAQAVEGLRHFVSRGALDIE
GLGAENIDTFFNAGLIKTAADIFTLRERRPAVTKALAERREEQARQREAASGKTRKNVRS
IEDRNYEGLDKLFAAIDSRREPELDRFIFALGIRHIGETTAAVLARTFSTIEELIRVGKE
TAAAEDPHAVFPSINGIGDTVIDALRDFFGNERNDEVLEKLLQQVKPKPYIVTVSADSEV
AGKTIVFTGSLEKMTRSEAKAMAERLGAKVAGSVSAKTDLLVAGPGAGSKLKLASELGVE
VIDEDTWLQRVGKS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaaacctgtcgattcgctcagcgaaagcgaggctgaagccgaactccagcgc
cttgccgaggagatcgccggtcatgaccggcgctaccatgccgaggacgcgcccacgatc
acggacgccgagtatgacgcgctgcggcggcgcaatcttgccatcgaggagcgctttccc
gggctggtgcgtgaggattcgccctcgctcagggtgggtgccgccccggcggaaggcttc
accaaggtgcgccatgccgtgccaatgctcagcctcgccaaggcctataccgacgccgac
gtcaccgatttcatcgagcgcggccggcgcttcttcgaccgcgacaaggatctcgacatt
gccttcaccgccgaaccgaagatcgacgggctgtcggcttcgctgcgttacgaaaagggc
gtgttcgtgcaaggcgcgacgcgcggcgacggcgctgtcggcgaggacatcaccgccaac
ctcaggaccatcgccgacattcccgccaagctgaagggttcaggctggcccgagaccatc
gagatccgcggcgaggtctatatgacctatgccgaattcgaggcgctcaaggcgcgctcg
gcggctgtggggggccaggattacgtcaatccgcgcaacacggcggccgggtcgctgcgc
cagaaggatccatccgtcaccgccagccgcaacctcaaattctttgcctacgcgtggggt
tacacgacggcggatccggcaccaacgcagtatgaagcggtgcagaaattcgccgattgg
ggcttcaagatcagcccgctgatggtgcgggcgaaatcggtcgaggaactggtcgcgcat
tatcacctgatcgaggagcaacgctcgtcgctcggctatgacatagacggggtcgtctac
aaggtcgaccagctggagctgcagcgccgctggggtttcgtcaccggtgagccgcgctgg
gccgtcgcgcacaaattcccggccgaacaggcgatgacgaccgtgcagaggatcgacatc
caggtcggccgaaccggcacgctggcgccggtcgcgcggcttgcgccggtgacggtcggc
ggcgtggtggtggagaacgtcacgctgcacaatgaagattatatcaagggcctggacagc
accggccagccgatccgcgacggcatcgacgtgcgcatcggcgacacggtggtgatccag
cgggcaggggacgtcatcccgcagatcgtcagcgtcgtcatcgacaagcgtccgcccgat
gccgtgccgtacgaattcccgcactcttgcccgatctgcggctcgccggcgacgcgcgag
atcaacgagaagaccggcaaggaggattcgcgccgccgctgcacgggcgaactgatctgc
ccggcgcaggccgtggaggggctgcgccacttcgtgtcgcgcggcgccctggatatcgaa
ggcctgggcgcggagaacatcgacacgtttttcaatgcgggtttgatcaagacagccgcc
gacatcttcacgctcagggagcgccgccccgccgtgaccaaggcgctggccgagcggcgc
gaggagcaggccaggcaacgcgaggccgcatccggcaagacccgcaagaatgtacgcagc
atcgaggaccgcaattacgaaggcctcgacaaattgttcgcggccatcgattcgcgccgc
gagccggagctcgaccgcttcatcttcgcgctcggcatccgccatataggcgagacgacg
gccgccgtgcttgcgcgaacattctcgaccatcgaggagctgatccgggtcggcaaggag
acggcggcggcggaggatccgcatgccgtcttcccgtcgatcaatggcatcggcgacacg
gtgatcgatgcgctgcgtgatttcttcggcaatgagcgcaatgacgaggtgctcgagaag
ttgctgcaacaggtcaagccgaagccctatatcgttaccgtctcggccgacagcgaagtt
gccggcaagacgattgtctttaccggttcactggaaaagatgacccgttccgaagccaag
gcgatggccgaacgtctcggcgccaaggtggccggttcggtttcggccaagaccgatctt
ttggtggcgggaccgggtgcgggctccaaactcaagcttgccagcgaactcggcgtcgag
gtcatcgacgaggacacctggctgcagcgggtcggcaagtcgtga
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