Megalobrama amblycephala (Wuchang bream): 125243644
Help
Entry
125243644 CDS
T08212
Symbol
setdb1b
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00310
Lysine degradation
mamb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125243644 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125243644 (setdb1b)
Enzymes [BR:
mamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
125243644 (setdb1b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125243644 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125243644 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
Pre-SET
THAP
MBD
DUF4537
PcrA_UvrD_tudor
Mis12
Motif
Other DBs
NCBI-GeneID:
125243644
NCBI-ProteinID:
XP_048009383
LinkDB
All DBs
Position
LG13:complement(20263453..20288251)
Genome browser
AA seq
1315 aa
AA seq
DB search
MACCAVNCNNRPSKKSGLHFFRFPLGDPDHFRLDQWMLNMKQQNWTPNKASRLCSEHFES
HHFTTDSRGRTCLKDTAVPTVFSFSEGKEKKPKRRSLVSINEVGMEVDASLSSEMELDPE
LEEELGVSLDELRRWIEEQVDGSEAVRQRKAQLEQLQEWVEKREKEVADMDALCSNASES
VVQCETLVKEVYSKMGLVYRESSSEDEGVGGANTSEVIEIDDDDDDDVIAVGCVVPPKKV
VTPAKDPALKEASAALQRTSQQVQNLAQTVNRAAPSGIATSAKAPSTQTHGALAVPAVFM
SSGPRNAPTQPNPNLKQDNIKLDMTLLGKKRTKTWHRGTLVAIKQVGNNLKYKVKFENKG
KSLLSGNHVAFDYHPTLERLFVGARVVARYKDGNQVWLYAGVVAEMPNSKNRMRFLIFFD
DGYASYVGLPELYPICRPLKKTWEDIEDASCRDFIEEYITSYPNRPMVLLKPGQIIKTEW
EGTWWKSRVEEVDGSLVKMLFLDDKRSEWIYRGSTRLEPMFNLKMNTANSQEKKMAGQQR
QRPNMGALRTKGPVVQYTSDNSTPGASRPIAPQLPPPRPLPAGPPQPTRTESPSLKSQMA
KKSTGPVALQPRQAVTSDLQPKPLIGTVQQNNTSRLFLLQSGPVHTLTPITPMSHNLQTT
VSTYTSERIPQEPSYQAPNDRLFYLTHNCTPDCLKRIRPTRPNLHRGRNPLLTPLLYEFR
RMTGRRRLNRKMSFHVIYKSPCGLSLRNMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRR
FQPQRPFYFIRDITSGREDIPLSCVNEIDNTPPPSVAYSKERIPADGVFINTSSDFLVGC
DCTDGCRDKSKCSCHQLTLQATGCTPGGQINPNAGYHHKRLEECLPTGIYECNKRCRCNA
QMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEM
GDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDMSRVKLPASSQHGKSTTKMEERNS
STTGKSQDDSSEDSDDDKDEDSNEDESDSSDDTFVKDTYYTTSSVWRSYTTRRQAKGIKE
ESQDSKDGLSVSAGEERKPPPMPEETGKSKVASWLTSQSSTSXNQSVKVEGGMKTEKKDV
MTLSDSDDVQTISSGSDDNKEREKKTQAVVKRQVAVKSTRGIALKSHGMMVKTGGGGGGG
GGSGPSHGHGGGGVEGGPKNTRQFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVF
VDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGRLL
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctgtgcggttaattgcaataacagaccgtccaagaagtctgggctccatttc
ttccgttttcctcttggtgatccagaccatttcaggctggatcagtggatgctcaacatg
aaacaacagaattggactcctaacaaggcttctcgtctgtgcagtgaacacttcgagagt
catcacttcaccactgactccaggggaaggacatgtctgaaggataccgccgtgcctacc
gttttctctttctccgagggcaaagaaaaaaagccaaaaagaagaagcttggttagtatt
aatgaggtgggtatggaggtggatgccagtttgagctcagagatggagttggatccagag
ttggaggaggagttaggggtctctttggatgagctgcgcaggtggatcgaggagcaggtg
gatggcagtgaggctgtgcggcagaggaaagctcagctggagcagctgcaggaatgggtt
gaaaagagggagaaggaggtcgctgatatggacgctctttgctctaatgcctcagagtct
gtggttcagtgtgaaactctggtgaaggaagtgtacagtaagatgggtctagtgtatcgt
gagagcagttcggaggatgagggtgtcggcggggcaaacacttctgaggtcattgagatt
gacgacgatgatgatgatgatgtcattgctgtgggatgtgtggttcctcccaagaaggtt
gtaactccagccaaggacccagcgttgaaggaggcttcagctgcccttcaaagaacatct
cagcaggtgcagaacctagcccagactgtcaacagagcagccccatcgggtatcgccaca
tccgctaaagccccctccacacaaacccatggtgctctggctgttccagcagtgtttatg
tcctcaggcccaaggaacgcacccacacaacctaaccctaatttaaaacaggataacatc
aagctcgacatgacacttttgggtaaaaaacgaaccaagacgtggcatcgtggaacactt
gttgccatcaaacaagtggggaacaatttgaagtacaaagtgaagtttgagaataaaggg
aagagtcttctctctggcaaccatgtggcatttgactatcaccccacactggagagactg
tttgttggtgcccgtgttgttgccaggtacaaggatggcaatcaagtctggctctatgca
ggtgtagtcgctgagatgcccaacagcaagaaccgtatgagattcctgatcttttttgat
gatggttatgcctcatacgtgggcctgcctgagctctaccctatctgcagaccattgaaa
aagacatgggaggatattgaggatgcatcatgtagagatttcattgaggagtacatcacg
tcatatcccaacagacccatggtgttgctgaagccagggcaaattataaagacggaatgg
gaagggacatggtggaaaagccgtgtggaagaagtggatggcagccttgtcaaaatgctt
ttcctggatgataagcggagtgagtggatttatcgtggttctacacgactagaacccatg
tttaatctgaaaatgaacacagctaacagtcaagagaagaaaatggctggtcaacaaaga
cagcggcctaatatgggagcattgaggacaaaaggccctgtagtgcagtacactagtgac
aacagtactcctggtgccagtcggcctatagccccgcagctcccaccacctcggccgctg
cctgccggacccccacagcctacccgcacagagagtcccagtttaaagagtcaaatggct
aagaagagcactggtccagttgcactgcagcctcgtcaggctgtgacctctgacctccag
cccaaaccactaattggcactgttcaacaaaacaatacatccaggctctttcttctgcag
tctggacctgtgcatacgttgacaccaatcaccccaatgtcccataatttgcagacaact
gtgtcaacctacacaagtgagcgtattcctcaggaaccatcctatcaggccccaaacgac
agactcttctaccttacacacaactgcactccagactgtctaaagcgcatccggcccact
cgtcccaacctgcaccgaggtcgcaacccacttcttacgccattgctatatgaattccgg
cgcatgacaggccgtagacgccttaaccgaaagatgtcgttccacgtcatctacaagtcc
ccatgtggcttgagtctgaggaatatggcagagatccagcgttacctcttccagacacac
tgtgacttcatcttcttggagatgttctgtctggacccctatgtgttggttgaccgccga
ttccaaccgcagaggcccttctactttatccgggacataacaagcggtcgtgaagacatt
cccttgtcctgtgtgaatgagatcgacaacacacctccacccagtgtggcctacagtaaa
gagaggatcccagcagatggagtctttattaacaccagctcagacttcctggtgggctgt
gactgcactgatggctgcagagacaaatccaagtgttcatgtcatcagctgactctacag
gctacaggatgtactccaggtggacagatcaaccccaacgctggataccatcacaagaga
ctggaagaatgtctccccacaggaatctatgaatgtaataagcggtgtcgctgtaatgcg
cagatgtgtactaaccgtctggttcagcatgggttgcaggtccgactgcagctctttaag
acccagaataagggctggggcattcgttgccttgatgacattgccaagggctcctttgtt
tgtatctatgcaggtaaaatcctgactgatgactttgccgataaagaaggtttggaaatg
ggcgacgaatactttgccaatctagaccacattgagagtgtggagaactttaaagaaggt
tacgagagtgaggcccactgctccgacagcgagggcagcggggtggacatgagcagggta
aaactacctgcttcctcccaacacggtaaatccaccaccaagatggaggagcgtaacagc
agcactaccggcaaaagccaagatgattcttctgaagacagcgacgatgacaaagacgaa
gactctaatgaagatgaaagtgacagctcagatgacacatttgtgaaagacacgtattac
accaccagctcggtgtggaggagctacaccacccgcagacaggccaagggaattaaagaa
gagagtcaggacagtaaggatggactaagtgtttctgcgggtgaggagaggaagccccct
cccatgccagaggagactgggaagagtaaagtagcatcttggctcaccagccagtcctcc
acttctngcaatcagagtgtcaaggtggagggaggcatgaagacggagaagaaggatgtg
atgaccctctctgacagtgatgatgtgcaaactatcagctcaggatcagatgacaacaag
gagagagagaaaaagactcaggctgtggtgaagaggcaggtggcggtgaagtccacacgt
ggcattgctttgaagtcccatggaatgatggtgaaaacggggggagggggtggaggagga
ggtgggtcaggcccatctcatggacatggaggtggcggggtcgaaggtggccctaaaaac
acccgccagttcttcgatggggaggaatcttgttatatcattgatgccaaactggaaggc
aacctcggacgctacctcaatcatagctgcagccccaatctgttcgtccagaatgtgttc
gtcgacactcatgatctgcgcttcccctgggtcgccttctttgctagcaagcgaatccga
gcagggacagaactgacatgggattataattatgaagttggcagtgtagagggcaaggag
cttctgtgctgctgtggatcaacagaatgcagaggacgactgctgtaa
DBGET
integrated database retrieval system
