Megalobrama amblycephala (Wuchang bream): 125245652
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Entry
125245652 CDS
T08212
Symbol
cacna1c
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
mamb04260
Cardiac muscle contraction
mamb04261
Adrenergic signaling in cardiomyocytes
mamb04270
Vascular smooth muscle contraction
mamb04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125245652 (cacna1c)
04020 Calcium signaling pathway
125245652 (cacna1c)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125245652 (cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
125245652 (cacna1c)
04261 Adrenergic signaling in cardiomyocytes
125245652 (cacna1c)
04270 Vascular smooth muscle contraction
125245652 (cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125245652 (cacna1c)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125245652 (cacna1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125245652
NCBI-ProteinID:
XP_048012279
LinkDB
All DBs
Position
LG14:17538223..17726149
Genome browser
AA seq
2194 aa
AA seq
DB search
MLRGLFGRRRLKHERLEEEVEVRFKGKLVSERELGYTFVRPGGSNYSSPSLAPVPSLNED
ERVGGGGGVLGLAPEHIPTPGAPLSWQAAIDAARQAKLMGTTGAPISTVSSTQRKRQHYT
KPKKQASTASTRPPRALLCLTLKNPIRRACINIVEWKPFEIIILMTIFANCVALAVYIPF
PEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLCHPNAYLRNGWNLLDFIIVVVGL
FSAILEQATKGDGGTSMGGKAAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVP
LLHIALLVLFVIIIYAIIGLELFMGKMHRTCFFFKDGHKGPISEEKPAPCAPSSAHGRHC
SPPNITQCMMGWEGPNDGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVY
FVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQA
EDIDPENDDEGLDDDKPRNLSMPASENESVNTDNAPAGDMEGETCCTRMANRISKSKFSR
YSRRWNRLCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHHKQPDWLTNVQDIANKVLL
ALFTGEMLLKMYSLGLQAYFVSLFNRFDSFVVCGGILETILVETKIMSPLGISVLRCVRL
LRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETRR
STFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLN
VFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKRQESEKPPLEDEKKEEKIEL
KSITSDGETPTATKINIDEYTGEENEEKNPYPVNDFPAGEEDEEEPEMPVGPRPRPLSDI
QLKEKAVPMPEARAFFIFSTSNKFRVLCHKIVNHNIFTNLILFFILLSSISLAAEDPVKN
DSFRNLILGYADYVFTGIFTIEIILKMTAYGAFLHKGSFCRNYFNILDLVVVSVSLISSG
IQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTSLLQFMFAC
IGVQLFKGKFFYCTDTSKQTQAECRGSYILYKDGNVGKPEKALRSWENSDFNFDDVLQGM
MALFAVSTFEGWPALLYRAIDSHTEDVGPIYNYRVVISIFFIIYIIIIAFFMMNIFVGFV
IVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKVWYVVNSTYFEYLM
FTLILLNTICLAMQHHGQSQSFNKAMNILNMLFTGLFTVEMILKLIAFKPRGYFSDPWNV
FDFLIVIGSIIDVILSEINPADPTSSPPSSVVRPMGLQNTEDNARISITFFRLFRVMRLV
KLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIGLRDNSQINRNN
NFQTFPQAVLLLFRCATGEAWQEIMLACSPNRPCEKGSEVGHTSEDCGSHFAIIYFVSFY
MLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTL
LRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTDGNLEQ
ANEELRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLV
AKIPPKTALSLQAGLRTLHDMGPEIRRAISGDLTVEEELERAMKETVCTASEDDIFRVKR
SGGLFGNHVNYYHQSDGHASFPQSFTTQRPLHISKSGSPGEAESPSHQKLVDSTFTPSSY
SSSGSNANINNANNTAIGHRYPKPTVSTVDGHTGPPLTTVPLPTWCFPNKSSDSSDSRLP
IIRREEASTDETYDETFLDERDQTMLSMDMLEFQDEESKQLAPMVEADVGEERRPWQSPR
RRAFLCPTALGRRSSFHLECLRKQNRPDVSQKTALPLHLVHHQALAVAGLSPLLRRSHSP
TLFTRLCSTPPASPSGRSGGGPCYQPVPSLRLEGSGSYEKLNSSMPSVNCSSWYSDSNGN
HRGSVQRTQRPVSLTVPPVTRRDSISLAHGSAGSLVEAVLISEGLGRYAQDPTFIQVAKQ
ELADACDMTMEEMENAADNILNANAPPNANGNLLPFIQCRDTGSQESRCGHALGLSTATG
SDELLGTELEHSEGAGQRNSALMEDEDMECVTSL
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggggctgttcggtcggcgcagactgaagcatgagcgactggaggaggaagta
gaggtgcggttcaaaggaaagcttgtgtcggagagagagctgggctacacgtttgtgcgg
ccaggaggctccaactattccagtccgtcgttggctccggtccccagtctgaatgaggac
gagcgtgtggggggcgggggtggggtgttgggtcttgcacctgaacacattcccacccct
ggcgccccccttagctggcaggcagccattgacgcggcacggcaggccaagctgatgggc
accaccggagccccgatctccaccgtgagctccacacagcgcaaacgccagcactacacc
aaacccaagaaacaggccagcactgcctccacacgcccaccccgagcccttctctgcctc
actcttaaaaaccccatccgcagggcgtgcatcaatatcgtggaatggaaaccgtttgaa
atcataattttgatgactatttttgcaaactgtgtggccttagctgtctacatccctttc
cctgaggatgattccaacgcaaccaactcaaacctggaacgggtggagtatctctttctg
atcatttttacggtggaagcgtttctgaaagttattgcatacgggctgctgtgtcaccca
aatgcgtacctgcggaatggctggaacctgttggatttcatcattgtggtggtagggctc
ttcagtgcaatattagagcaggccactaaaggagacggtgggacttcaatgggaggcaag
gctgcggggtttgatgtaaaagccctgcgagcctttagagtgttaagacctctgagactc
gtgtctggagtacctagtttacaggtggtgctgaactccatcattaaagccatggttccc
ctcctgcacatcgctctgctagttctgttcgtcatcatcatttatgccatcatcggcctc
gagctcttcatgggcaagatgcacagaacctgttttttcttcaaagacggacacaaaggt
cctatttctgaagagaagccggccccctgtgccccaagctctgcccatggacgacactgc
tccccgcccaacataacgcagtgcatgatgggatgggagggtccaaatgatggaatcacg
aactttgataactttgcatttgccatgctgactgtgtttcaatgcatcacgatggagggc
tggactgacgtcctgtactggatgcaggatgccatgggttatgagcttccctgggtctat
tttgtcagtctggtcatctttggatcctttttcgttctaaatctggttctgggtgtgttg
agcggagagttctctaaagagcgagaaaaggccaaagctcgcggcgatttccagaagctc
cgtgagaagcagcaactggaggaggatctaaagggctacctggactggatcacgcaggcg
gaggatatcgaccctgagaatgatgacgagggactggatgacgacaagcctagaaatctg
agtatgccggccagtgaaaatgagtcagtgaacactgataatgctccagctggagacatg
gaaggagagacctgctgtacccgcatggcaaataggatctccaaatccaaattcagtcga
tattcacgccggtggaatcggttatgtcggcgcaagtgccgtgcagcagtgaagtcgaat
gtgttctactggctggtgattttcctggtatttttgaacacacttaccattgcctcagag
caccacaagcagccagactggctcaccaatgtacaagacatcgccaataaggtgttgctg
gctctttttaccggtgagatgctgctgaagatgtacagcctgggcctacaggcatatttc
gtctccctttttaaccgcttcgacagttttgtggtgtgcggtgggattctggaaaccatc
ctggtggagacaaagatcatgtcacccctcggcatttctgtgctgcgctgcgtacgtctg
ctccgcatcttcaagataaccaggtactggaactctctcagtaatctggtggcatctctg
ctgaactcggtgcgttcgattgcatccctgcttctgctgctcttcctgttcatcatcatc
ttcagtctgctcggaatgcagctttttggtggcaagttcaacttcgatgagacgcgccgc
agcacctttgacaatttcccccagtctctcctcaccgtctttcagattttgaccggtgag
gactggaactctgtgatgtatgatggcatcatggcgtatggagggccctcctttcctggc
atgcttgtttgcatttatttcatcatcctcttcatctgtggaaactacatcctcctgaat
gtcttcttggccattgccgtggacaacctggcagacgccgagagtctaacatcagcacag
aaagaggaagaagaggagaaagagaggaagaaactggccagaacggctagtcccgagaag
cgccaggaatctgagaaaccacctctggaggatgaaaagaaagaggaaaagattgaacta
aaatccatcacttctgatggagagacaccaactgccaccaagatcaacatagatgagtac
acaggggaggagaacgaggagaagaatccatatcctgtgaacgatttcccagcaggagag
gaggatgaggaagagccagagatgcctgtaggtcctcgtcctcgtccactctccgacatt
cagttgaaggagaaagccgtccccatgccagaagccagagctttctttattttcagcacc
agtaacaagttcagggttttgtgtcataagattgtaaaccacaacatcttcaccaattta
atcctgttctttatactgctgagcagtatttcactggcagcggaggacccagtgaagaat
gactcattcaggaatctgattctaggctatgcagattatgtgtttacaggaatcttcacc
atagagatcatattaaagatgacagcgtatggagcgttcctacataagggttcattttgt
cgaaattattttaatattttggatctggtggtggtcagtgtgtctctgatctcctctgga
attcagtcaagtgccattaatgtagtgaagattctcagagtgctgagggtattgaggccc
ctgagagcaattaacagagccaagggcctcaaacatgtggtccagtgtgtgtttgtagcc
atccgcaccattgggaatatcgtcatcgtcacctctttgttgcagttcatgtttgcctgt
attggtgttcagctcttcaagggcaaattcttctactgcacagacacctctaaacagaca
caggccgagtgcagggggtcatacatattgtacaaggatgggaatgttgggaagccagag
aaagctctgcgttcatgggagaatagtgacttcaactttgatgatgtcctgcagggaatg
atggctctgtttgctgtgtccacttttgagggttggccagcgctcctctacagagccatt
gactcccatacagaggatgttgggccgatctacaattaccgtgtggtcatctctatattc
ttcatcatctacatcatcatcatcgccttcttcatgatgaacatatttgtaggtttcgtc
attgtgacatttcaggagcagggagagcaagagtacaaaaactgtgagctggacaagaac
cagcgtcagtgtgtggaatatgccctgaaggctcgtcccctgcgcaggtacatccccaag
aacccgtatcagtacaaggtttggtacgtggtgaactccacctactttgagtacctgatg
ttcaccctcattcttctcaacaccatctgcctggccatgcagcatcatggtcaatctcag
tccttcaacaaagccatgaatatcctcaatatgttgttcaccggcctcttcactgtggaa
atgatcctcaaactcatcgccttcaaacccaggggttactttagtgacccctggaatgtt
tttgacttcctcatcgtaattggcagcattatagacgtcattctgagtgagatcaaccca
gctgatcccacctcctctcccccctcctctgtggtaagaccaatgggcctccaaaacact
gaagataacgccaggatctcaatcacgttctttcggctgttccgagtgatgaggctggtg
aagctcttgtctcggggagagggcattcggacgctactctggaccttcattaaatccttt
caggctcttccttatgttgctttgctgatcgtaatgctgttcttcatctatgccgtcatt
gggatgcagatgtttggtaagattggcctgagggacaacagccagatcaaccgaaacaac
aactttcagacgtttcctcaggctgttctgctgctcttcaggtgtgcaacaggggaggca
tggcaggaaatcatgctggcctgttctccaaaccgcccttgtgagaaggggtcagaggtc
ggccataccagtgaagactgtggcagccactttgccatcatctactttgttagcttttat
atgctttgcgccttcctgatcattaacctctttgtggctgtcattatggacaactttgac
tatttaacacgtgattggtcaatattggggccgcatcatctggatgagttcaagaggata
tgggcagaatacgatcctgaggccaagggtcggataaagcacctggatgtggtgacgtta
ctgcgcaggattcagcctccccttggatttggaaagctttgtccacatagagtggcgtgc
aagcggcttgtgtccatgaacatgcctctcaatagcgacggaacggtgatgttcaatgca
actctctttgccctagtacggacggctctacgtatcaaaactgatggtaacctggaacaa
gcgaatgaggaactcagggccatagtgaagaagatctggaagaggacaagcatgaagctg
ctggatcaagttgttccccctgctggagatgatgaagtaacagtggggaagttctatgcc
acattcctaattcaggaatacttcaggaaatttaagaagcgcaaggaacagggcctggtg
gccaaaattcccccaaagactgctctttcactgcaggctggcctgcgtacactgcatgat
atgggtcctgagatcagaagagcgatatcaggagacctgaccgtggaggaggagttggag
agagccatgaaagaaactgtttgtactgcttctgaggatgatatcttcagggtaaagcgg
tctggcggcctcttcggtaaccacgtcaactactaccaccagagcgatggtcacgcctcc
ttcccacagtctttcacaacacagcggccattgcacataagtaaatccgggagtcccggc
gaggcagaatctccatctcatcagaagctcgtcgactccactttcactccaagcagttac
tcttcctcaggatccaacgcaaacatcaacaacgccaacaacacagccatcggacaccgg
tatcccaaacctactgtcagcacagtggatggacacacagggcctccccttaccaccgtc
ccactgcccacatggtgctttcccaataagagctctgattccagtgacagtcgtctcccc
ataatacgtcgagaggaagcgtctacagatgagacgtacgatgaaacatttctagatgag
agagatcagaccatgctctcaatggacatgctggaatttcaggatgaagagagcaagcaa
ttggctcccatggtggaggcagatgtaggggaggagaggaggccttggcagtctccacgg
cgacgggcctttctctgccccactgcactgggtcgacggtcttcctttcacttggagtgt
ctgagaaagcaaaacagacctgatgtttctcagaagacagcactaccactgcacctggtg
catcatcaggctctggctgtggcggggttaagtcccttgctgagacggagtcattctccg
acgctgttcacacgtctgtgttccacaccccctgcgagtcccagcggccgtagcggagga
gggccgtgctaccagcctgttccatctctgcggttggagggcagcggatcttacgagaaa
ctcaacagcagcatgccatctgtgaactgcagctcgtggtacagtgacagtaatggcaac
cacagggggagcgtgcagaggacgcagcgacccgtgtccctcacggttcctccggtcaca
cgcagagactccatatccctggcccacgggagcgccggcagccttgtggaggcggtgttg
atatccgagggtttgggtcgctatgcacaggatcccaccttcatccaggtagcgaagcag
gaactagcggacgcctgcgacatgaccatggaggagatggagaacgccgctgacaacatt
ctcaatgctaacgcgccgcccaatgccaacggaaacctgctacccttcatacagtgcaga
gacactggctcgcaggagtcccgttgcggccacgcactgggcctctctaccgccacaggc
tctgatgagctgttggggacggagttagagcactccgagggggctgggcagaggaacagc
gctctgatggaggacgaagatatggagtgtgtgacaagcttgtag
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integrated database retrieval system
