KEGG   Megalobrama amblycephala (Wuchang bream): 125245912
Entry
125245912         CDS       T08212                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04145  Phagosome
mamb04514  Cell adhesion molecules
mamb04672  Intestinal immune network for IgA production
mamb05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    125245912
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125245912
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    125245912
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    125245912
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mamb04147]
    125245912
Exosome [BR:mamb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125245912
  Exosomal proteins of epithelial cells
   125245912
  Exosomal proteins of breast milk
   125245912
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 I-set ig
Other DBs
NCBI-GeneID: 125245912
NCBI-ProteinID: XP_048012697
LinkDB
Position
LG14:44779303..44797561
AA seq 243 aa
MTVRLSSIKMDLHITILTLTIVLSTSAEFEHEAFAYLGCSDTEEEYYIGYDEEEVGHIDF
KQKRAVSTLPDFTGSMTFPGFYGIGVDAMVECKNDLLIHIKNFKSLPLEIDAPKTSVYPK
DDVQLGIQNTLICHVTAFYPPSVNISWTKNNVHVSEGMSLSLYRPRKDLTFNIFSTLKFT
PAEGDIYSCMVNHKALQGQPQTKIWDVDVALPSVGPAVFCGVGLTIGLLGVAVGMFFLNK
EHN
NT seq 732 nt   +upstreamnt  +downstreamnt
atgactgttcgactctcatctatcaaaatggacctgcacataaccattctaactctaacc
attgttctttcaactagtgctgaatttgaacatgaagctttcgcatatcttggatgctct
gatacggaagaagaatattacattggatatgatgaagaggaggtgggacatattgacttt
aaacagaagagagcagtatcgacattacctgactttacgggatctatgacatttcccgga
ttttatggaattggtgttgatgcaatggtagaatgcaagaatgacttactaatacatatt
aaaaatttcaagagcctgccactagaaatagatgcacccaagacttcagtctatccaaag
gatgatgttcagctgggtattcaaaacaccctcatctgtcatgtgactgctttctatcct
ccatctgtcaacatctcatggactaagaataatgttcatgtatcagagggcatgagttta
agtctgtaccgtccaaggaaagatcttaccttcaacatcttttccacactgaagtttaca
cctgctgaaggagacatttacagctgcatggtgaaccacaaagccctccaaggtcaacct
cagaccaaaatatgggatgttgatgttgccctcccaagtgttggtccagctgtgttctgt
ggagtgggtctgactattgggctgttgggagtagctgtgggaatgttcttcctcaataaa
gaacacaactaa

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