Megalobrama amblycephala (Wuchang bream): 125247087
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Entry
125247087 CDS
T08212
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125247087 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125247087 (tdg.2)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
125247087 (tdg.2)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125247087 (tdg.2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
125247087
NCBI-ProteinID:
XP_048014215
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All DBs
Position
LG15:19425188..19430223
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AA seq
440 aa
AA seq
DB search
MAVRPPIKMEERQYSSLTAPMDYLQYWYQTSPQQYQPEQVPHYHQMVNAAQFTERPMEDK
IMTDLSVHQDPYLDQPQQHHQDSYLDQPHQDPYLDQPQQHHQDSYLDQPQQPQQPSVQQP
ALPTTPAKGKKRGRPLKSEVKEKTDAEENAKKAKRTLDRFNGMSVEEVMARKLPDVITHN
LDMLIIGINPGLLSAFKGRHYPNPGNHFWKCLFLSGLTEEQLNHMHDQTLPERYGIGFTN
MVERTTPGSKDLSNKEIREGGHQLLEKLQKYRPLIAVFNGKCIYETFCKEIFGVKAKNLE
FGLQPYKVPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQLKGVVKAPEIQET
DYTFDVTLAKEDAKRLAIKEEQHDPEYEETCAHGSWGEPQQAFGVHPSTDTDQVTDNRWT
MQPFADQIPDIRCSNNNRTT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaagaccaccaattaagatggaagaaaggcagtattcatctctgacggcccct
atggattatcttcagtactggtatcaaaccagtccccagcagtaccagccggagcaggtg
ccgcactaccaccagatggttaatgccgcccagttcaccgagagacccatggaggacaaa
atcatgactgatttatctgtgcatcaagatccatatctggatcaacctcaacagcatcac
caagattcatatctggatcagccacatcaagatccatatctggatcaacctcaacagcat
catcaagattcatatttggatcaacctcaacagcctcaacaaccctctgtccaacaacct
gcccttccgacaactccagcaaaaggaaagaaaaggggaaggcctctaaaaagcgaagta
aaggaaaagacggatgctgaagagaatgccaaaaaagcaaagaggacgttagatcggttc
aacggcatgtcagtggaggaagtcatggctagaaagctgccagacgtcatcacacataat
cttgacatgctgattatcggcatcaatcctggactgttgtcagccttcaagggaaggcat
tatccaaatcctgggaaccatttttggaagtgcttgtttctgtccgggctgactgaagaa
cagctgaatcacatgcatgatcagacactacctgaacggtatggcataggcttcaccaat
atggtggagaggaccacacctgggagtaaagacctgtcaaacaaagagatccgtgaaggt
ggacaccagcttttggaaaagctccagaagtacagacctttaatcgctgtgttcaatgga
aaatgtatttacgaaacattttgcaaggagatttttggagtgaaggccaagaacttagag
ttcggattgcagccctacaaagtgccagaaacggagacggtttgctatctgatgccatca
tcaagcccacgctgtgcccagtttcctcgtgctcaggacaaagtgcacttctacatcaag
ctaaaagagctcagggatcagctgaagggagtggtgaaggctccggagatccaagagaca
gactacacatttgatgtgactctggccaaagaggatgccaaaagactggcaatcaaagaa
gagcagcatgaccccgagtacgaggagacctgtgcacatggatcatggggggaaccacaa
caagcgttcggggtccatccttctacagatacagaccaggtaacggacaaccggtggaca
atgcagccatttgcagaccagattccagacatcagatgtagcaacaacaaccgaaccacc
tga
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