Megalobrama amblycephala (Wuchang bream): 125248561
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Entry
125248561 CDS
T08212
Symbol
tiam1b
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04530
Tight junction
mamb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125248561 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125248561 (tiam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
DH_Alsin
Motif
Other DBs
NCBI-GeneID:
125248561
NCBI-ProteinID:
XP_048016468
LinkDB
All DBs
Position
LG16:complement(37617357..37726669)
Genome browser
AA seq
1591 aa
AA seq
DB search
MGNTESHSGGHGYYGDGQRHLSRKHMSRSLRLSSKQTYCSRRTPSGKPEHRNSETSTRSS
STPSIPQSLADHGLEPFNDSDMLPDFSGPIWVDRVAMNLRPMSFHNHPAHSPTASHTVTA
KPADAEPPEDTTQVQHTRDGSQEGSSFKKKRSKSADMWREDSLEVSLSDLSQEHLTSTEE
IGDTPEDCEARLQASAQELLDSTRANSLDELYGPKSPTCRPTHGRYAKWHKGGTTSREGD
EDKIISPCEDDGAAYGAYTLPCRRSHCLSEGPTNHQGVMQGRRAQTIQDVTAGDGSDYED
SGIDGLTGDSEASQHQARRYKTMSASFSVYSTSAGGAFTGSDSGSSSGAGAGPSDGTQGV
YENFRQELEQNVSPAEVPEERSSAFSDEQSSVTLSSAYHTDPLLNVAAVQGTVRKAGRLA
VKNFLVHKKSKKVELAPRRKWKSYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWAENSI
VQAVPEHPKKDFVFCLSNSLGDSFLFQTCSQTELENWITAIHSACAAAFARQHHREDTVR
LLRAEIRKLEQKIDMDEKMKKMGDMQLSAVTDSKKRKTILEQIFLWEQNLEQFHMDLFRF
RCYLSSLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTESGVRRRTQAM
SRSTSKRKSRFSSLWGLDTHSKRKSKGHPSINQVFAEGDDPVKSPLEGMFEGSSSETTKD
TKTPVKGLPRPSTDHDIWSRDHLTPSWVLLPNDQPVLAIIQPGESALDMLETICKAHQLD
ATKHYVRLKFLIENQVQFYIPKPEEDIYDLLYKEIELCCKIRKVIQFDRDESCMIGYGFS
ISVVEEDSVQQLYITDVRAGGLAFAKGLNAGDEILQLNRKDARTLTFADMKVAFAQVSLS
LTVNTLPPVDRRQLCFLPPRRSDAVDNLYTDIFSQSQEEILDDGVGLIVETSGDGLDDDS
ELFAEFDDYGKSTEQVAAFCRSLHEMNPSSDVVSPSSGPESSSLPPSNATPRQLSDADKL
RKVICELVETERTYVKDLNCLIGRYLTPLQKESFLTQDELDVLFGNLPEMLEFQVEFLKT
LEDGTRLVPDLEKLERVEEFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKAKT
DAAFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELHSLTDPDSEEHYHLNVAM
KAMNTVASHINEMQKIHEEFGAVFDLLISEQTGEKKEVADLSMGDLLLHTSVTWINPSSS
LGKCKKEPQLATFVFKTAVVFICKDYSKQKKKMGGSHRASVSGEEKDPFRFRHMIPTDAL
QVRTLSNTDGESAAVCEIIHVKSESEGRPERVFQLCCSSPESKKDFLKMVHSILRDKQRR
QLLKTESLPLSQQYVPFGGKRLCALKGARPAMNRAVSAPTRTLGRRKLVRNRFTIDTDIV
FDTEPDSDSPDSQHAQQQGVIPAGDTDRWVEEQFDLQRYEEQEQDVKETDILSDDDDFCP
SAMSPSTEPDAEGLLSALSLEGDTAEEEEEEEDEEIESKKDYKSQHAKLSHLGKQCAMSV
ASVDEQALPDEVIWVRRDSSTENETQDETQS
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacagaaagtcatagcggcggccatggttactatggagacggtcagcggcac
ctctcccgtaagcacatgtcccgctcgctccgtctgtccagcaagcagacgtattgttcc
cgccgaacgccgtctggaaagccggagcaccgcaactccgagaccagcacccgctccagc
agcactcccagcatccctcagtcgctggccgaccacggcctggagcccttcaacgactcg
gacatgctgcccgacttcagcggtccaatttgggtggaccgcgtggccatgaatctccga
cccatgtccttccacaatcatccggcccattctcccacagcgtcccacaccgtcaccgcc
aaaccggccgacgccgagccaccagaggacacgactcaagtccagcacacacgggacggc
tcccaagaggggtccagctttaagaagaaacgctccaagtctgcagacatgtggagggag
gactcgctggaggtgtccttatccgacctgagccaggagcacctgaccagcacggaggag
atcggagacacgcccgaagactgtgaagcccgtttgcaggcgtctgctcaggagctgctg
gactcgacccgcgccaattctttagacgagctctacggaccgaagagccccacctgcagg
ccgacacatggacgctatgccaaatggcacaagggtggcactacaagcagagaaggtgac
gaggataaaattatctcaccctgcgaggacgatggcgccgcctacggtgcgtacacactg
ccctgccgccggtctcactgtctgtcagagggaccgaccaatcatcaaggagtcatgcaa
gggaggcgggcacaaaccatacaggatgtcacggcaggagacggcagcgattatgaggac
agcggtatcgatgggctgacgggggacagcgaggcgtctcagcatcaggctcgccgctac
aagaccatgtctgcgtcgttctccgtatactccacgtcagcagggggcgccttcaccggg
agcgacagtgggagcagcagcggggctggagcggggccctcagacggcacacagggtgtc
tatgagaacttccgtcaggagctggagcagaacgtgagcccggcggaggttcccgaggag
agaagctcagcgttcagcgacgagcagagcagcgtgacgctgagctccgcctaccacacg
gacccgctgctgaacgtggccgccgtacagggtacggtgcgcaaagccggacgcctcgcc
gtcaaaaacttcctggtgcataaaaagagcaagaaggtggagctcgcccctcgccgcaag
tggaagagctactgggtgtctctcaaaggatgcactctgtttttctacgagacagacggg
cgatcgggcatcgatcacaacagcatccctaaacatgcagtgtgggctgagaacagcatc
gtccaggccgtcccagaacaccccaaaaaagatttcgtcttctgcctgagtaactcgctt
ggagactccttcctgtttcagacttgcagtcagacagagcttgaaaactggatcactgcc
atccactcagcctgcgccgcggccttcgctcggcagcatcaccgcgaggacacggtgcgt
ctgctgcgggcggagatacgaaagctggagcagaagatcgacatggatgagaagatgaag
aaaatgggagatatgcagctctctgctgtcactgactccaagaagaggaagaccattctg
gagcagattttcctctgggagcagaatttagagcagttccacatggatctgtttcggttc
cgctgttacctgtccagcctgcagggcggcgagcttcccaaccccaaacgcctgctggcc
ttcgcctcccgtcccaccaaactggccatgggccgactgggcatcttttcggtctcctcc
ttccatgcgctggtggcggctcgcactgagagcggcgtgaggcgtcggacgcaagcgatg
tcgcgctcaaccagcaaacgcaagagtcgcttctcctcactatggggtctggacacccac
tccaagagaaagagtaaaggtcatcccagcattaaccaggtttttgcagagggagatgat
ccagttaaaagccctctagaaggcatgtttgagggttcttccagtgagacaacgaaagac
accaagaccccagtgaaaggtctgccaagacccagcacggatcatgacatctggtccaga
gaccacctcactccatcatgggtgttgctgccaaacgaccagcctgtgttagccatcatc
cagcccggagagtcggccctcgacatgctggaaactatctgcaaggctcaccaactggac
gccactaaacactacgtgcggcttaagttcctcattgagaaccaagtgcagttctacatc
cccaaaccggaggaggatatttatgatctgctgtataaggaaatcgagctctgctgtaag
atcaggaaggtgatccagtttgatcgggatgaatcctgcatgatcggctacggtttttct
atctctgtggtggaggaggacagcgtgcagcagctctatatcactgacgtgagagctgga
ggattagctttcgctaaaggtctgaatgcgggagatgagattctacagctgaaccggaag
gatgcgcgcactctgacctttgctgacatgaaggtggcgttcgctcaggtctctctctct
ctcaccgttaacacgctgccccctgttgaccgccgacagctctgcttcctgccgccgaga
cgctctgacgcagtggacaacctctacacggacatcttctctcagagtcaggaggagatt
cttgacgatggggtgggtctgattgtggagacgtcaggagatggtttagacgacgactcg
gagctcttcgctgagtttgacgactatggaaagagtacagagcaggtcgcagctttctgc
cgcagtctgcacgaaatgaatccctcatccgatgtcgtctctccttcatccggcccggag
tcttcctcgctccctccgagcaacgccactccacgccagctgtccgatgccgacaaactc
cgcaaagtcatctgcgaactggtggagacggagcgcacctatgtcaaagatctgaactgt
ttgatcgggcgatatctaacccctctgcagaaggagtctttcctcactcaggatgagctg
gacgtgctgttcggaaacctcccggagatgctggaattccaggtggagtttttgaagact
ctggaagacggaacccgactggtgccggacctggagaaactggagcgagtggaagagttc
aagaaaatcctcttttctctgggtggctcgttcctgtattacgccgaccgcttcaagatc
tacagcgctttctgtgccagccacactaaagtgcccaaagtgctggtcaaagcgaagaca
gacgcggccttcaaggcgtttctggacgagcgcaaccccaaacagcagcattcgtccacg
ctggagtcatacctgatcaaacccatccagagagtgctgaaataccctctgctgctgaga
gagctgcactcgctcaccgaccctgacagcgaggagcactaccatctgaacgttgcaatg
aaagccatgaacacggtggccagccacatcaacgagatgcagaagatccacgaggagttt
ggagccgtgtttgacctcctcatctctgaacagactggagaaaagaaagaggttgccgac
ttgtctatgggagatttactcctccacaccagcgtgacatggatcaacccgtcctcctca
cttgggaagtgcaagaaagagccacagctggccacattcgtgttcaaaaccgctgttgtg
ttcatctgtaaagattactccaaacagaagaagaaaatgggtggttcccatagagcatcg
gtctcaggtgaggagaaagatccgttccgtttccgtcacatgatccccactgatgcgctt
caggtgcgcacactgtccaatacagatggagagagcgcagccgtctgtgagatcatccat
gtgaagtctgaatcagagggaagaccagagagagtgtttcagctctgctgcagctctccc
gagagtaagaaagacttcttgaagatggttcactccatcctgagagataaacagcgccgt
cagctgttgaagactgaaagccttcctctcagtcagcagtacgttcccttcggaggaaaa
cgcctgtgcgctcttaaaggagcccgaccagccatgaacagagcagtttctgctccgact
cgcactctgggccgaaggaaactagttcggaaccgcttcaccatcgacacggacatcgtt
ttcgacacggagcccgacagcgactcgcccgactcccaacatgctcagcagcagggcgtc
atcccggcgggcgacacggaccgctgggtggaggaacagtttgaccttcagcgctacgag
gagcaggaacaggacgtgaaggaaacggacatcctgagcgacgacgacgacttctgtccg
tccgccatgagcccgtccaccgagccggacgcggagggactgctttccgccctctcgctg
gagggagacacggctgaggaggaagaagaggaggaggacgaggaaatagagagcaagaag
gactacaaatcccagcatgccaagctgtctcatttagggaagcagtgcgccatgtcagtg
gccagtgtggatgagcaggcgctgcctgatgaggtcatctgggtcagacgggacagcagc
acagagaacgagacacaggatgaaacccagagctga
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integrated database retrieval system
