Megalobrama amblycephala (Wuchang bream): 125249535
Help
Entry
125249535 CDS
T08212
Symbol
nphs1
Name
(RefSeq) LOW QUALITY PROTEIN: nephrin
KO
K24496
nephrin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125249535 (nphs1)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125249535 (nphs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set_2
ig
Ig_2
V-set
fn3
C2-set_3
Ig_DSCAM-DSCAML_C
NDNF
Motif
Other DBs
NCBI-GeneID:
125249535
NCBI-ProteinID:
XP_048017802
LinkDB
All DBs
Position
LG16:complement(10236738..10352359)
Genome browser
AA seq
1239 aa
AA seq
DB search
MDFLFSLVLSSAWVFLLVDFKGVCGQQAFKTEPRNVTVKAGATTLLKCEVLRASGAVQWV
KDGLLLGPQRSLPGYPRYSMTGDQQKGQYHLQILNVSLEDDGPYECQVGQSVSSRAIVSR
TAWLNVQIPPSQPYIQLESDEPWVEGDEYTVTCIAPDAKPPAEITMFRDGEELTETDSFT
MSGSQDKLLNTHAEVIIRARSSDDARGLTCRAKNPASPRALETGMTMRVYFPPQAPVIIG
LGNEEVKAGSFLRVVCMSYGGNPLATLHWIKNGEVLSTSWEVDVVSRMSSSVLKMEVKPE
DNHAVLQCESVNQVSRSPMSLTRTLTVLFEPAEVTLLGSFEAVEGQEINLSCYTSSSNPP
VHIRWWLGFKELNRTNVTISEGDNGGMMTMSNLTHKVSREDNGLPLTCEAFNKGTRFSSV
RSENLIVYYPPQKVWLDAPPPNVFLHAGKTLRLVCFSSGGNPTGQLVWLKNNKVVPTASK
QVSSERGVSRDLLLTLQPSDNLATYRCDSSNKAKKVISAQTKLRVLFPAVSVKIVAKQKE
LRKGQTLDLDCLAGSSNPSANISWSLGPVMLKGVDQSPKKAEFGGMSRTSKLSLILDSHH
WKKRITCQAFSNVLSEGVNNFYSLNVLFPPEFSDDQTDEVQVIEDETATLPVKVLANPDE
ITCDWIFQGEKLVKERDPRYHFDDWTLEIVNVSRRDGGDYIIECSNAEGKNRTKLKLDVQ
YSPTVHMKSDPVSVNLGDTADLLCVADANPITSSMFSWKWMGEEEVDDLGEQSEDEGTGL
LTIYEVTRDRAGFYQCTADNGIAPPGSVEGQLIVRFAPELQKGPQWKKVASRGDGSNDAN
VVCQAQGVPRVHFNWAKNGFPLDLGNPRYEEKTVVTGTVHTSVLTVINVSAALDYAIFTC
TAHNSMGEDSLDIQLLSTNHPDPPSDLKLLRVNHNSVTLEWMPGFDGGLTQNFRVRYQWT
GSVSFMYVDVFPPTATVYTVTGLNPSTAYNFSVNALNTMGESSYADNNKILTVTTTDAEE
ADDGVSTADKDPALAGHGLPVYAVVILVVGGLLLFLYPLSCFLLARWKKRGWSLKEDTRS
ISQETKSEEQRSTSSSSTRYASRELINASAQRTLLIDSSSEPDSNIYESYGRQESPHYYY
SPALYTHLEGPEDHDGRHGTSPLAHDYEEVTGWGTYQDLQGYSLLPPSAHSDPRALSTYH
EGRVYGKADVDVAAGVYDSMVYRRRRDTDLPFELRGELV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttattttcactcgtactctcaagtgcctgggtttttcttcttgtggatttc
aaaggtgtatgtgggcagcaggcattcaagacagagccacgtaatgtgacggtcaaggcg
ggggccacaactctgctgaagtgtgaagtgctgagggcctcaggggccgtgcagtgggtt
aaagatgggctgctcctgggacctcagagatcgctgcctggctacccacgctacagcatg
acaggagaccagcagaaaggccagtaccatcttcagattctcaacgtgagtttggaagac
gacggcccctatgagtgccaagtgggccagtccgtgagcagccgtgccattgtgtcccgt
acagcctggctcaatgtgcagatcccaccctcacagccgtacatccagctggagtctgat
gagccgtgggtggagggagacgaatacacagtgacctgcattgctcctgatgcaaaacct
cctgcagaaatcaccatgttcagagatggagaggagctgacggaaaccgattcttttaca
atgtcaggctcacaggataagcttttaaacactcatgccgaagtcataatcagggcacga
agctcggacgacgcacgggggctgacgtgtcgagcgaagaacccagcaagccctcgagct
cttgagactggcatgaccatgagggtatactttcccccgcaggctccggtgatcatagga
ttaggaaatgaagaggtcaaagctggttcctttctgagggtggtgtgcatgtcgtatgga
ggcaaccctttagccactctgcattggattaagaatggagaagtcctgtccactagctgg
gaggtggacgttgtgtcacgtatgtccagtagcgtgttgaaaatggaggtgaagccagag
gacaatcatgctgtgctgcagtgcgagagcgtcaaccaagtgtctcgttcaccgatgtcc
ctcactcgcactctcaccgtcttgtttgagccagctgaggtaacgttactgggctccttc
gaagctgtggagggacaggagataaatctgagctgttacacttcctccagtaatccgccg
gtccatatccgctggtggctcgggttcaaggagctcaacagaacgaatgttaccatctct
gagggggataatggtgggatgatgacgatgtctaacttgacgcataaagtgtcacgtgag
gacaacggtcttcctctgacttgtgaggcattcaataaaggcacccgcttctctagtgtt
cgatctgaaaatctcatcgtttactatcctcctcagaaggtgtggttagatgctcctcca
ccaaacgtcttcttacacgctggtaaaactcttcgtttagtctgtttctccagtggtgga
aatcccacaggtcagctggtgtggttgaagaacaataaagtcgtgccgaccgcatcaaag
caggtgtcttcagagcgtggtgtgtcacgagatctccttctcaccctccagcccagcgac
aatctggccacctaccgctgtgattcctccaacaaagccaagaaagttatatctgcccaa
accaaactcagggttctgtttccagcagtgagcgtgaagatcgtggccaagcagaaggag
ctgcgcaagggtcagacacttgatctggactgcctggctggcagcagcaatccctctgca
aatatcagctggagtttgggccccgtgatgctgaaaggagttgaccagtctcctaaaaag
gctgaatttggtgggatgtcccgaaccagtaagctgtccctcattcttgattcacatcac
tggaagaaaaggatcacctgccaggccttcagtaatgtgctgtccgagggtgtcaacaac
ttctacagtctgaatgtgctctttcctccagagttttcagatgaccaaaccgatgaggtc
caggtcattgaggatgaaaccgccacgcttcctgtcaaagtcttggccaatccggatgaa
atcacctgcgactggatttttcagggcgagaagcttgtgaaagaaagagatcctcgttat
cacttcgacgattggaccctggaaatcgtgaacgtttctcggcgagacgggggcgattac
atcatagagtgttccaacgctgaggggaagaaccgcacaaaactcaaactggatgtacag
tattccccgactgttcatatgaagtctgatcctgtgtctgtgaacttgggagacaccgct
gacttactgtgtgtcgctgatgccaaccccatcacctccagtatgttttcgtggaagtgg
atgggtgaagaggaagtagatgatctaggagagcagagtgaagatgaaggcactggtttg
ttaactatatatgaagtgacccgtgaccgggcaggtttttaccagtgtacagcagacaac
ggcatagcacctccaggcagtgttgaaggacagctcatcgtacgctttgctccagagctt
cagaaggggccgcagtggaagaaggtggccagccgtggggacggcagcaacgatgcaaat
gtggtgtgtcaggcacaaggcgttcctcgtgtgcacttcaactgggcaaaaaatggattc
cctttggacttgggcaaccccaggtacgaggagaagactgtggtgacaggtaccgtccac
accagcgttctgaccgtcataaacgtgagtgcagcgctggactacgccattttcacctgc
actgcccacaatagcatgggagaagactctctagacatccagctcctcagcaccaaccac
cccgatcccccatcagatctgaagctgctccgtgtcaaccataactctgtgactctggaa
tggatgcctgggtttgacggtggtttgacacagaacttccgtgtcaggtaccagtggacg
ggatcggtgagtttcatgtatgtggacgtgtttcctccgacagctactgtgtatacagtc
acgggcctcaacccttcaactgcgtacaacttttcggtcaacgctctcaatacaatggga
gagagcagctatgcagacaacaacaaaatactgacggtcaccactaccgatgcggaggaa
gctgacgacggggtctccacagcagacaaggacccagcacttgcaggtcatggtcttcct
gtctatgccgtggtgatcctggttgtgggtggcctacttttattcctatatccattgagc
tgctttctattggccaggtggaaaaaaagagggtggagcctgaaagaagacaccagaagc
atttcacaggagacgaaaagtgaggagcagaggtccacgtcgagcagctcaacacgctat
gcgagcagagagcttatcaacgcctcggcacagcgaacgctcctcattgacagcagctcc
gagcctgacagcaacatctatgagagctacggacggcaggagagtcctcattattactac
agtcctgcactgtatactcaccttgaaggccctgaggatcatgatggcagacacggcaca
agccctctcgctcatgactacgaagaggtgacaggctgggggacgtaccaggatctgcag
ggctactcactgctgcccccttctgcccactctgatccacgagcactctccacatatcat
gagggaagagtatacggtaaagctgatgtggacgtagcagccggagtttatgattctatg
gtgtacagacgcaggagagacacggacttgccgtttgagctccgaggggagcttgtttaa
DBGET
integrated database retrieval system
