Megalobrama amblycephala (Wuchang bream): 125250134
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Entry
125250134 CDS
T08212
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125250134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125250134
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mamb04054
]
125250134
Membrane trafficking [BR:
mamb04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125250134
Pattern recognition receptors [BR:
mamb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125250134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
zf-C3HC4_4
NLRC4_HD2
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
NOD2_WH
RING_XB3-XBAT31
U-box
FISNA
zf-RING_5
zf-RING_6
zf_RING_Vps8
nSTAND3
LRR_6
AAA_16
AAA_25
Motif
Other DBs
NCBI-GeneID:
125250134
NCBI-ProteinID:
XP_048018487
LinkDB
All DBs
Position
LG17:9135909..9146535
Genome browser
AA seq
1044 aa
AA seq
DB search
MADVGMSWLEDQFNSSVCLDLLKDPVIFPCGHSYCMSCITGCWDQDDQKRVYSCPQCRQT
FTPRPVLSKNTMLAEVLEKLKKTKLHATRPVWCECDICTWDKNKAIKSCLVCRISFCQNH
LKEHDSFFQRHSMTDVTGRLQEMICSQHDKPLEYFCHTDQQYICYLCMMDEHKNHETVSA
AAERSEKLDIQHKKKGVMRCYAASADVFGPLIFPFGPDSPSTTVRYPLSSDAQASASQPK
EKLDRWQIQKIYGMDWSSINLQYRKTVIDRCKFVTEYNPPSNERVELAARYTEPVIIQRS
KEQAEKYYREHVKSAQASGAKTSSQLLSNDKNHSIRIDQLFSADSDGKTPKTVILSGDSG
RGKSFTLQKIMLDWASGELYSEIFDLVFLLKCEELKCVSDVKSLIDLLSCRSSLTSDQIS
EILELTPEKVLFLIDGMDEYESCSLIHFVPSHSNPSKRASSMVILRNLLRGVLLPESFML
VTMRSIAADTVMNLIEGPQRFTEIMGFSERGVQEYFHKFFQDEQLFKKTYESVKTNEGLM
TTCSVPLLCWMVCFCLKKYSTDSQVMVKKLKTTTSIYVHFVSALLEHHGQSKYVLITLRN
LGQLAQRGIQNQQVFFDENDVAETGLVAAKCLFLYKDYVNGKEKPEPVFKFMHFSFQWFF
AALWVLLDEEVSWWKVSELLNLMGSAIVECLSLERRSNPIPSVLLFFYGLLNEEVISSLF
KKIKLTVSNTIKLRKRKLKKTLKQRILTMTTWHGCELYVLQCLYELQNVGFERKVLEAHS
FMDLSNISLRSTDCWVLLYCLQCCPHITELNLMYCDLTAENLKILQPALCMCETLRLSVK
NLPEVGDLIQILGESKILKELKVQEDEYSTESPRWTLDLSVTSGEILLSLSSFPAVLNIS
LTCSHSEITNIDWTLFLQTLSKAGKAEDSSALEDHVSLLLSSFHSVCLKKLELKVFSLNE
SWASGIISLVETCTSLQEIRLNISAEPSEMNLHCQTCVHIVDSDQWVQVEPSVCTDEGGS
KFRISTQAGSIRVQQDQNAMGLFW
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgttggtatgtcatggcttgaggatcagttcaactcttcagtctgtctggat
ctactgaaggatccagtgatctttccctgtggacacagttactgtatgagctgtattaca
ggctgctgggatcaggatgatcagaagagagtctacagctgtcctcagtgcagacagacc
ttcactccaagacctgttttaagtaaaaacaccatgctggctgaagtgctggagaaactc
aagaagacaaaactacatgctactcgccctgtttggtgtgagtgtgacatctgtacttgg
gataaaaacaaagccatcaagtcttgtctggtgtgtcggatctctttttgccaaaatcac
ctcaaagaacatgacagtttctttcaaagacacagtatgacagatgtcacgggacgactg
caggagatgatctgctctcaacatgataaaccactggaatatttttgtcatactgaccag
cagtatatctgttatctgtgtatgatggatgagcacaaaaaccatgagactgtatcagct
gcagcagagaggagtgagaaactggatatccagcacaaaaagaagggggtcatgcgttgt
tatgcagcttcagctgacgtgtttgggcctctcattttcccttttggaccagactcaccg
agcaccactgtcagatatcccctctcttctgatgcacaagcatctgcctctcagccaaaa
gagaaactagatagatggcaaatacagaagatatatggaatggattggagcagcataaat
cttcagtacaggaagacagttattgacagatgcaagtttgtgacagagtataaccctcca
tctaatgaacgtgtggaactggctgcccgttacactgaaccagtgatcattcagaggagc
aaagagcaggctgagaaatactatcgtgaacatgtgaagtctgctcaagcttctggagca
aaaacatcatctcagctgttatcaaatgacaagaatcacagcatcagaatagaccagctg
ttcagtgccgacagtgatggaaaaacaccgaaaactgtgattctcagtggtgattctgga
agaggtaaatccttcacattacagaagatcatgttggactgggcttctggagaactttac
tctgaaatatttgatctagtttttctgttgaagtgtgaagagctgaagtgtgtttctgat
gtgaagagcttgattgatctcttgagctgcaggagcagtttaacatcagatcagatctca
gagatactagagttaacaccagagaaagtcctcttcctcattgatggaatggatgagtat
gagtcttgttcactcattcattttgttccttcacacagtaatccatccaagagagcgtca
tctatggttattcttaggaacctgttgaggggagtcttgctgccagaatcattcatgctt
gtaactatgagatctatagccgctgatactgtgatgaatctcattgaggggcctcagcgt
ttcactgagattatgggtttctctgagagaggggtgcaggagtacttccacaagttcttt
caggatgagcaactctttaagaaaacatatgagagtgtgaagacaaatgaaggcctcatg
actacctgctctgtgcctttgctgtgttggatggtctgtttttgtctgaagaaatactca
actgatagtcaggttatggtgaaaaaactaaagacaaccacctccatatatgtgcacttt
gtgtctgctctactggagcatcatggccagagtaagtatgtcctcatcacgctgaggaat
ctgggtcagctggcacaaagaggaatacaaaatcagcaagtcttttttgatgaaaacgat
gtggcagagactggcttagttgccgccaagtgtctgttcttgtataaagattatgttaat
ggaaaagaaaaaccagaaccagttttcaagttcatgcacttcagctttcagtggtttttc
gctgctctttgggtcctgcttgatgaagaagtgtcttggtggaaagtcagtgaactgttg
aacttgatgggctcagctatagttgaatgcctatctcttgaaagaagatcaaatcccatc
ccatcagttttgctgttcttctatggtctcttaaatgaggaggtgatcagctcacttttt
aaaaaaatcaaattaactgtctctaacaccataaaactgaggaaaagaaaactgaagaaa
acactgaagcaaagaattcttacaatgacaacatggcatggatgtgaactatatgttctc
caatgtctgtatgagctccaaaatgtggggtttgaaaggaaagttctggaagctcacagc
ttcatggatctgtctaacatttccctgaggagcacagactgttgggtgctgctgtactgt
cttcagtgctgtccacacatcacagaactgaacctcatgtactgtgatttaacagctgaa
aacctcaagattcttcagccagcactctgtatgtgtgagactctgaggttgtcagtgaaa
aaccttccagaagttggagatttgatccagattcttggagaatcaaaaatcttgaaagaa
ctgaaagttcaagaggatgaatacagcactgagagtcccagatggacgcttgatctgtca
gtgacttctggagaaatcttgttgtctttgagctcatttccagcagtcttaaacatcagt
cttacatgttcacactcagagataaccaacattgactggacactcttcttacagacactc
agcaaagcaggaaaagcagaagactcttcagctcttgaggatcatgtcagtttgctgttg
tcttcatttcactctgtgtgtttgaagaagttggaactgaaggtgttcagtctgaatgag
agctgggcttctgggatcatttccctcgttgagacctgcaccagtctacaggagatcagg
ctgaacatctctgctgaaccttctgagatgaatcttcactgtcagacttgtgttcacatt
gttgatagtgatcagtgggttcaggtggagccgtcagtctgtacagatgaaggagggtca
aagttcaggatcagcactcaggcagggtcgattcgagtgcagcaggaccagaatgcgatg
ggtctgttctggtga
DBGET
integrated database retrieval system
