Megalobrama amblycephala (Wuchang bream): 125250449
Help
Entry
125250449 CDS
T08212
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K20894
shank-associated RH domain-interacting protein
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04217
Necroptosis
mamb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125250449 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125250449 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125250449 (sharpin)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
125250449 (sharpin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
PH
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
125250449
NCBI-ProteinID:
XP_048018983
LinkDB
All DBs
Position
LG17:15404565..15415645
Genome browser
AA seq
405 aa
AA seq
DB search
MMAVSSGCSTVLMSVRVSVRPLSVGSDSLRLQLSMNANRPGLFTLTLRHTDRGGRSVSLA
EFDLRSVKYEITSARCHELRLTKPPHDCLTFTFRSEQEAQEWATVMMSSLRESHRVANIS
HSSHDGLQNLKCGEKNSVLSLSMKEELCIELTRAIETGDAHAAVHYATDLARQQIALTIQ
PALRDTDDREISLAVVVEDASSSCCVTVKIHPHVTVASLKQQMFVEYGFHPRVQRWVIAQ
SLCSDGRSLASYGIYRDGDTAFLYLLSARHACLDHQQDQENSLPMLTAAPPPPNASLAYT
PASSGPSSHDWRGYSTLPPRFSHSSTGSSGCGIDKPSVSDIINLEMLQLGGSKLKSSNTQ
PGWSCPSCTFINKSTRPGCEICSTDRPNPPNPSSVQQEKARRSNQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgagctcgggctgcagtacggtgctgatgtcggtgcgggtgtcggttcgg
ccgctcagtgtgggctcggattccctgcggctgcagctcagtatgaacgcgaaccgcccg
ggactcttcacactcaccctcaggcacaccgaccgcggaggacgcagcgtgtctctagca
gagtttgatctgcgttcggtgaagtatgagatcacgtcggctcgatgtcacgaactgcgt
ctcaccaagccgccccacgactgtctcacgtttaccttccgcagcgagcaggaggcccag
gaatgggcaacagtcatgatgtcatcactgagagagtcacacagagttgccaacatttca
cattcctcacatgatggactgcagaatttgaagtgtggagagaaaaactctgtcttgtcg
ctgtcaatgaaagaggagctgtgtatagagcttactcgagcaatagagactggagatgct
catgcagctgtgcactacgccacagatctggcccggcagcagatcgcactgactattcaa
ccagcactgcgggacactgatgacagggagataagcttagctgtggtagtggaagatgca
tcatcttcctgttgtgttacagtaaaaatccaccctcatgtgactgtcgcttctctaaag
cagcagatgtttgttgagtatggttttcaccccagggtgcagcgctgggtgatcgctcag
agtctgtgctccgatggtcgttctttagcatcgtacggcatctatagggacggtgacaca
gcatttctctacctcttgtctgcccgtcacgcttgccttgatcaccagcaggaccaggag
aacagcctcccaatgctgactgcagctccaccaccaccaaacgcctcgctcgcttacacg
ccggccagcagtggccccagcagccatgactggagaggctacagcacgttaccaccccga
tttagccacagtagcacaggcagtagtgggtgtggcatagataaacctagcgtcagtgac
atcataaaccttgagatgttgcaacttggagggtccaaactgaaatcaagtaacacacag
ccaggctggtcctgcccctcctgtacattcataaataagtcaacgagaccaggctgtgaa
atctgcagcacagatcgaccaaaccctccaaatcccagtagcgttcaacaggaaaaagca
agaagatctaaccagtga
DBGET
integrated database retrieval system
