Megalobrama amblycephala (Wuchang bream): 125253108
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Entry
125253108 CDS
T08212
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125253108
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125253108
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125253108
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125253108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
125253108
NCBI-ProteinID:
XP_048022845
LinkDB
All DBs
Position
LG18:9207605..9263089
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AA seq
1019 aa
AA seq
DB search
MAQLYYNKASNSPYRDRIPLQIVRAEVELSAKERAYLTAVEKGDYAGVKLALEEAEIYYN
INVNCLDPLGRSALLIAIENENLEVMELLLSHGVLMGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPSLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVE
CVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEFRQE
YEELSQQCKLFAKDLLDQARSSRELETILNHRDDHSEELDPRECRDLAKLKLAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSTLGTFI
KKPFIKFICHTASYLTFLLLLLLASQHIVQTDLHVQGPPPTIVEWLILPWVLGFIWAEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKMVAYFKYNSSRPRVEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETKASEEPNHCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSVWYLCVWLHCRLCGHGEPRQECKHGNLKEFTERHADNLIQNQHYQEVIRNL
VKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSSEATLQ
DETAEPEEDEEADGLGGHRCGDGGESSRSKASTSFSQCYRSNRESQFSVSALFKSMSGPA
KERLESNGLRKNISHPAAFVRTSSRMLHFSRSKKNSLQRLGTLMSRMNGHIPDPHVETPG
VQQSPYSVSNRVPQTSWQDPQTLSKVTQSEMHLHTLGLGPSETEHNPMQATSQRANGRDS
LLLRPPSHSLPPLHCASRLTASSSQLLASSDDLCHGWMGPCDSLGSSSWEQEESVTTQL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgtactacaacaaggccagtaactccccgtaccgcgatcgcatccccctg
cagattgtgagggcggaggttgagctctctgccaaggaacgagcctacctgacggcggtg
gagaagggcgactatgctggagttaaactggcccttgaggaggccgagatctattacaac
atcaacgtgaactgcctggacccgttgggccgcagcgcactcctcattgctattgagaat
gagaacctggaggtgatggagctgctgttgagtcatggcgtgctcatgggcgacgctctc
ctctacgccatccgcaaggaagtggtgggagcggtggagttactgctgtcctacaggaag
cccagtggcgagaaacaggttccttctctcatgatggacacacagttttcggagtttaca
cccgatatcacaccaatcatgttggctgcccacactaacaactatgagataatcaagctc
ctagttcaacgaaaagtcaccataccgcggccacaccagatccgttgtgactgcgtggaa
tgtgtatccagctccgaagtggacagcctgcggcactcccgttcacgcctgaacatctac
aaaactcttgccagcccctctctcatcgccctttccagcgaagatcccatcctcacagca
ttcaggctgggctgggagctgaaggagctcagtaaggtggagaatgagttcaggcaggag
tacgaggagctatcgcagcagtgcaaacttttcgctaaagacttgctggatcaggcccgt
agctcccgtgagctggagaccatcctgaaccatcgggatgaccacagcgaggagctggat
ccccgtgaatgcagagacctggccaagctcaagctagccatcaagtaccaccaaaaagag
tttgtagctcagcccaactgccagcagctcctggcaacactgtggtatgatggtttcccg
ggttggagacgtcgtcactgggcagtgaagctcgtcacttgcttcatcattggcctgctc
ttccctgtcttctccctcatataccttctggctccaaagagcactcttggaaccttcatc
aagaagccattcatcaagttcatctgccacactgcctcctacctgaccttcctcttgctc
ctcctcctcgcctcacagcatatcgtgcaaacggacctgcatgtacagggacctccaccc
accattgtggagtggctgatcttaccctgggttctaggcttcatctgggcagagattaaa
gagatgtgggatggaggtttcacagagtacatccatgactggtggaacctgatggatttt
gcaatgaactccctctacctggccaccatatctcttaaaatggtggcctactttaagtac
aatagctctcgtcctcgtgtggagtgggagatgtggcaccctacgctcatcgcagaggct
ctcttcgctatcgccaacatcttcagctcgctgcgtctcatctctctgttcactgccaac
tctcacttgggcccactgcagatttctctcggccgcatgctgttggacatcctcaagttc
cttttcatctactgtctggtgctgctggcttttgccaacggcctcaaccagctctatttc
tactatgagacgaaggcgtccgaagagcccaaccactgcaaagggatccgttgtgagaag
cagaacaatgccttctccacgctgtttgaaactcttcagtctcttttctggtctgtgttc
gggctgttgaatctgtacgtcaccaatgtgaaggctcgtcatgagttcaccgagtttgta
ggggccaccatgttcggcacttacaacgttatctcgctggtggtgctactgaacatgcta
atcgctatgatgaacaattcttaccagcttattgctgatcacgcggacattgagtggaag
tttgctcgtacaaagctgtggatgagctactttgatgagggagggacgttaccgccaccc
ttcaacatcatacctagtccaaagtctgtgtggtacctgtgtgtgtggctgcactgccgt
ctgtgtggacacggagagccaaggcaagagtgtaaacatggaaacctcaaagagttcacg
gaaaggcatgccgataacctcattcagaaccagcactaccaggaggtgatcagaaacttg
gtaaagcgatacgttgcagccatgatccgcagcgccaaaacagacgaagggctgacagag
gagaacttcaaggaactgaagcaggacatctccagtttccgctacgaggttcttgacctg
ctgggcaaccgaaaaccaccacgccgcacatattcttccagcagtgaggccactctacag
gacgaaacagctgagcctgaggaagatgaggaggcagatgggctcggaggacaccgatgt
ggggatgggggagagtcatccagatccaaagcatctacgtccttttcccaatgttacagg
agtaaccgagagtctcaattcagcgtatcagccctgttcaagtccatgtcgggaccggcc
aaagaaagactggagagcaatggcttgagaaagaacatatcccaccctgctgcatttgtg
cggaccagcagccgcatgctgcacttttcacgctccaagaaaaactctttgcaacggttg
ggaacgctaatgtcgcgtatgaacggacacatcccggatccgcatgtggagaccccggga
gttcagcagtctccatacagcgtctcaaacagagtaccgcaaacatcttggcaagacccc
cagacgctgtcgaaggtaacacagagcgagatgcacctgcacacgctgggattgggaccc
tctgagactgaacataacccaatgcaggccacatctcaacgggcgaacggcagggacagt
ctcctcctccggccacccagccactcgctgcccccgctgcactgtgcttccagattgacc
gcctccagctcccagctcttggcctccagtgatgacctgtgccatggctggatgggaccc
tgtgacagtttaggctcctccagctgggaacaagaggagtctgttacgacacagctgtag
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