Megalobrama amblycephala (Wuchang bream): 125253992
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Entry
125253992 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04260
Cardiac muscle contraction
mamb04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125253992
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125253992
04261 Adrenergic signaling in cardiomyocytes
125253992
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125253992
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125253992
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
VWA_CoxE
DUF2201
DUF6884
Motif
Other DBs
NCBI-GeneID:
125253992
NCBI-ProteinID:
XP_048024255
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Position
LG19:21911464..22060648
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AA seq
1097 aa
AA seq
DB search
MMVRSRSTDLTMNPFRISVMMMFIFASVHISCPSQFPSPLMIKEWVDQLQQELVSLADTA
SAGNDLKQIFMDNQNYFTVETNNAAQLVETAARNIENFLKKRATALQTLATAAENFQMEH
QWKDEFEEDDIVYFNAKDNLDANETEGRKNRIRPEFKEDPSFKNRLTSYNHTAVHIPTDI
YDGSTIVLNELNWTEALEDVFKKNREEDPTLLWQVFGSATGLARYYPASPWMDARKTPSK
IDLYDVRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVV
HFNTKVNNTACFDHLVQANVRNKKILKDAVQNITAKGITNYTKGFEFAFNQLSNPNITRA
NCNKIIMLFTDGGEERAEEIFSRYNIDKKVRVFTFSVGQHNYDTGPIKWMACANKGYFYE
IPSIGAIRINTQEYLDVLSRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSRE
GESQNQHQNQLILGVMGVDVSLDDIKRLTPASQXIGPNGYYFAIDPNGYVLLHPNLQPKN
PKFQEPVTLDFLDAELENDIKVQIRTLMIDRDPGEKTIETLVKSQDERYIDRGIRTYTWA
PVNGTDYSLALVLPEYSLHYIEANLGNTIKQAMSQWGNKVSETMQQEKFEEYGYTFIAPR
EYCKDLKVSSNNTQFLMDFNDYIDRKTPNDPMCNATLVNRLLLDAGLTADLVKVWKEQSV
DGVLARFVATDGGITRVYPKSAGEEWGENSETYDSSFYKRSLDNDIYIFTAPYINKSRES
GYESGILVSKAVDLDINGAKLKPAVVGVKLNVSAWMNSFINATTKKNCKDEICGCLRNDK
QVDCVILDDGGFLLMSNQDEYITQIGQFFGEVDPVLMITLVNTSLFSFNKTYDYQSVCDP
ERETKAAAGLRSVYVPTIADMLTVGWWASTAVWSVLQQLLLSLTLPNVMGTAYSEDDLSD
AFSKESCITEQTQYFFENENKSFSGAMDCGNCSRMYRAEKLPNTNLVFLISDAKSSCLSC
DPKPLRQAEQPSTGPDPCVLAQTPRYRKGPDVCFDNNADEDATDCGGGCSLSPSLWPMLA
LQLLLLWLLTGTGTYLS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgctcgagatcaacagatctgaccatgaatccgttccgaatctccgtgatg
atgatgttcatcttcgcatctgttcatatctcgtgcccatcgcagttccccagtccgctc
atgataaaagaatgggtagatcaactgcagcaggagctggtttctttagcagacacagcc
agcgctgggaatgatctaaaacagatctttatggataatcagaattatttcactgtggaa
acaaataatgcggcacagcttgtggaaacagcggcacgaaatatagaaaattttttgaag
aagcgagccacagctctacagactttggcaaccgcagcagagaatttccaaatggagcat
caatggaaagatgaatttgaagaggatgatatagtttactttaatgccaaggataatctt
gatgccaatgaaacagaaggaaggaaaaaccgaatcagacctgaatttaaagaagacccg
tcattcaaaaaccgcctcacctcctacaaccatacggctgtgcatatcccaacggacata
tatgacggttccactattgtgttaaatgagctgaactggaccgaagcgttagaagacgtc
tttaagaagaaccgagaagaggatccgacgctactatggcaagtgtttggcagcgctact
ggattagctcgctattacccagcttccccttggatggatgccaggaaaacacccagcaaa
atcgacctgtacgatgtgcgccgacgaccttggtatgttcaaggtgctgcttcgcccaag
gacatgctgattcttgttgatgcgagtggaagtgtgtccggactgacccttaaactgatc
cgaacttctgtcagtgaaatgctggagacactttctgatgatgattatgtcaatgtcgtc
cattttaacacaaaagtgaataacacagcatgtttcgaccacctggttcaagctaacgtc
cgcaataagaagatcttaaaagatgcagttcagaacattacagccaagggcatcaccaac
tacaccaaaggctttgaatttgccttcaatcagctctcaaatccaaacatcaccagagca
aactgcaacaagattataatgctgtttactgacggaggcgaggagagagcagaggaaatc
ttcagcagatacaacattgacaaaaaggtgcgtgtgttcacgttctctgtgggtcaacac
aactatgacacagggccaataaagtggatggcctgtgctaataaaggatatttttacgaa
atcccttccattggagccatccgcataaacacacaggaatatctagatgttttgagcagg
ccgatggtccttgcagatgctaaacaagtgcagtggaccaacgtttacctggatgctctg
gagttgggcctagtcatcacaggcacactacctgtgttcaacaagaccaaatccagggag
ggcgaatctcagaaccagcatcagaaccagctgattttaggagtgatgggggtggatgtg
tctctcgacgatatcaaaagattgacgcccgcttcacagtgaattggtcctaatggatat
tatttcgcaattgacccaaacggttacgtgctgctccatccaaacctgcaaccaaagaac
cccaaattccaggaacctgttacactggattttctggatgcagagctggaaaatgacatt
aaagtccagatacggactttgatgattgacagagaccctggggagaaaacgatcgaaacg
cttgtgaaatctcaagatgagagatacattgatcgaggaatcaggacatacacctgggca
ccggttaacgggacagactacagcctggccttggtcttgcctgaatacagtctgcattac
atcgaggcaaacctggggaacactataaaacaagccatgtcacaatgggggaacaaggtc
tctgagaccatgcagcaggagaaatttgaggaatatgggtacacctttattgcacccagg
gaatactgcaaggacctgaaagtctcatccaacaacacccagttcctgatggacttcaat
gattacattgatagaaaaacaccaaatgatcctatgtgtaatgccactcttgtaaaccgg
ttgctgttggacgccggtctcacggcggacctcgtcaaagtctggaaggagcagagtgta
gatggagttttggcccgctttgtggctacagatggaggcattacacgtgtgtatcctaaa
agtgctggggaagaatggggtgaaaactctgagacctatgactcaagtttttacaaaagg
agtctggacaatgacatatatatcttcactgccccatacatcaacaagagcagagagtct
ggttatgagtctggtatccttgtcagtaaagcagtggatttggacattaatggagcaaaa
ctcaaacctgctgtggtgggagtcaaactcaacgtgtcagcctggatgaacagcttcata
aacgctaccaccaagaaaaattgcaaggatgagatctgcgggtgcctcaggaatgataag
caagtggactgtgtgattctggatgatggcggctttctgctcatgtccaatcaggatgaa
tatatcacacagataggtcagttctttggtgaagtggaccctgttctgatgatcactctg
gtcaacacctcgctgttctcctttaataaaacctacgactaccagtccgtctgtgaccca
gaaagagaaactaaagctgctgcaggactccgttctgtatatgtgccaacgatagcagat
atgctaactgtaggctggtgggcctccactgcggtctggtcagttttgcagcagctcctt
ctcagtctgactctcccaaatgtcatggggacagcatactcggaggatgacctctcggat
gcgttctccaaagagagctgtatcaccgaacagactcagtatttctttgagaacgagaac
aaatctttctctggagctatggactgtggaaactgctccagaatgtaccgggcggagaag
ctccctaacacgaatttggtatttttgatctctgacgcaaagagttcctgcctctcatgc
gatcccaaaccactgagacaagccgaacagccctctactggtcctgacccatgtgtgctg
gcccagacccctcggtacagaaaagggccggacgtctgcttcgacaacaacgcagatgag
gacgcgactgactgtggtggtggctgcagtttgagtccgtctctctggccgatgttggct
cttcagctccttctactctggctgcttaccggaaccggaacatatttgtcctga
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