Megalobrama amblycephala (Wuchang bream): 125254163
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Entry
125254163 CDS
T08212
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125254163 (trpc6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125254163 (trpc6b)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125254163 (trpc6b)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Cas8b_C
Motif
Other DBs
NCBI-GeneID:
125254163
NCBI-ProteinID:
XP_048024584
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Position
LG19:complement(26826375..26853756)
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AA seq
860 aa
AA seq
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MSSDHTSVKHTSVHQRMNTDFEKYPLPRYCKRWSNDDIQRHALAKSRRMATRRPAYMFNA
RYSSLSSTEERFLEAAEYGNIPVIRRMLEELPELNVNCVDYMGQSALQLAVANEHLEVTE
LLLKKENLARIGDALLLAISKGYIRIVEAILGHQAFADTTKLTSSPLQAETQDDFFAYDE
DGTRFSHDITPIILASHCHEYEIVHILLRKGARIARPHDYFCKCNSCLYHQRHDSFSHSR
SRINAYKGLASPAYLSLSSEDPVLTALELSNELAVLANIEKEFKNDYKKLSMQCKDFVVG
LLDLCRNTEEVEAVLNGDTETGGHFDKSDRPNLVRLKLAIKYELKKFVAHPNCQQQLLSI
WYENLSGLRQQTTAVKLLVVLGVVVGLPILALLYWIAPSSKLGKIIRGPFLKFVAHAASF
TIFLGLLIMNAADRFEGTTLLPNMTIHDHPSQLFRMKTTPFTWMEMLIISWVIGMIWAEC
KEIWSQGPREYLLEPWNLLDFGMLTLFVTSFIARFMAFWHANVAQSYVDKHYTDLSNITL
PLEIEYYRLARVHWVPSDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVK
DIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKQNGAFTTVEESFKTLFWAIFGLSEVKSVV
INNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINNSFQEIEDDADVEWKFARAKLWFS
YFEEGGTLPVPFNLIPSPKSVISLAIKLKELLLIPLHRHKEDLKEDTELNVSGKQKESSE
KNSPHTSRYQRIMKRLIKRYVIKAQTDKEGDEVNEGELKEIKQDISSLRYELLEEKSRQT
EELAELVRRLGERLASQQKL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgaccacacttctgtcaaacacacttctgttcatcaacggatgaacaccgac
tttgaaaagtatcctttgccacggtattgcaagaggtggagcaatgatgacattcagagg
cacgcattggctaagagccggcgcatggctacgcgaagaccggcctacatgtttaacgcc
cgttacagtagtttgtcctcaactgaagagcgtttcctagaggcggctgagtatggaaat
atccctgtcatccgtaggatgctagaagaacttcctgaacttaatgtcaactgtgtggac
tacatgggccagagtgcattgcagcttgcggttgccaatgagcacctagaagttacagaa
ctcttgctgaaaaaagagaacctggccaggataggtgatgctttgcttttagccataagt
aaaggatacattcgtattgtggaggccattttgggccaccaggcctttgcagacacaacc
aaacttactagcagccccctccaggcagagacacaagacgacttcttcgcctatgatgag
gatggcactcggttttcccatgatattacacccattatactagcttctcattgccatgaa
tacgagattgtgcacattctgctaaggaagggtgcccgcattgcgcgcccacatgactac
ttctgcaaatgtaacagctgtctttatcaccagaggcatgactcttttagccattcgcgt
tccagaatcaatgcctacaaagggctggctagccccgcctacctgtccctgtccagtgag
gacccagtactgacggctctagagctcagcaatgaactggctgtactggccaacatagaa
aaagagtttaagaatgattataagaagctgtctatgcaatgtaaggattttgtagttgga
cttctggatctttgtcggaatacggaggaggtggaagccgttttaaatggagacacagag
acaggtggccactttgacaagagcgacagacctaatctagttcggttaaaactggccatc
aaatatgagctgaaaaagtttgtagcccatccaaactgccaacagcagcttttgtccata
tggtatgagaatctgtctgggctcaggcagcagaccacagctgtcaagttacttgtggtt
ctgggggtggtggttggacttcccatcctggccttactgtactggatagcaccctcaagc
aagttggggaagatcatacgtggtcctttcctaaaatttgtggcacatgcagcttccttc
acaatctttcttggccttctcatcatgaacgctgctgaccgttttgaagggacaactctc
ttaccaaatatgaccatccacgaccacccctcccaattgttccgcatgaagaccacacct
tttacctggatggaaatgttgatcatttcctgggtcataggaatgatttgggctgaatgc
aaagaaatatggtctcagggtcctcgggaatatctgctggagccttggaatttgctggac
tttggaatgctgaccctttttgttacttccttcattgccagatttatggcattttggcat
gcaaatgttgctcagagttacgtcgacaagcactacacagatctatcaaacattaccttg
ccccttgagatagaatactatcgtcttgctcgtgtccactgggttccttcagaccctcag
ctgatctccgagggcctttatgccatcgcagtggttctgagcttctctcggattgcgtac
atcctgccggccaatgaaagctttgggcccttgcagatctctctgggcaggactgtgaaa
gacatatttaaattcatggtgatcttcataatggtgtttgtggccttcatgattggaatg
tttaacctctactcatactatcgtggagcaaagcaaaacggtgctttcacaactgtggag
gagagctttaaaactttattctgggctatttttggactttctgaggtcaagtctgtcgtc
atcaacaacgggcacaaattcattgaaaatattggctatgtactttatggagtctacaac
gttaccatggttatcgtcttactcaacatgctcatcgccatgatcaacaactcattccag
gaaattgaggatgatgcagatgtggagtggaagtttgccagggctaagctgtggttctct
tactttgaggaaggagggacgctgcctgtgccatttaacctcatccccagccccaaatca
gtcatcagcctggctataaaactcaaagagctcctgctaataccccttcacagacacaaa
gaggacctgaaagaggacacagagctcaatgtgtcgggtaaacaaaaagagtccagtgag
aagaattcgcctcatacaagtcgctaccagaggatcatgaaacggctaatcaaacgatat
gttatcaaagcacagactgacaaagagggagatgaagttaatgaaggggaactaaaggag
ataaagcaggacatctcaagtttacgctatgagctcctggaggagaagtcccgtcagaca
gaggagctagcagaactggtcaggagactgggagagaggctcgccagtcaacagaaactg
tag
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