Megalobrama amblycephala (Wuchang bream): 125255088
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Entry
125255088 CDS
T08212
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04140
Autophagy - animal
mamb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125255088 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125255088 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125255088 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125255088 (plekhm1)
Membrane trafficking [BR:
mamb04131
]
SNARE
SNARE associated proteins
Others
125255088 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
125255088 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
MCPVI
Motif
Other DBs
NCBI-GeneID:
125255088
NCBI-ProteinID:
XP_048026005
LinkDB
All DBs
Position
LG20:4822368..4850493
Genome browser
AA seq
1096 aa
AA seq
DB search
MMNEGLTGVERHEVCKVGLTEARGAMLATQTPESGPETKDVKQWIKEKIALTLKALQKRY
ITTDTAVTSEDLEANLLCCALEAAFIHGIKSKFIRFDGGNSRKGGSRGALPQPVFWSLLK
TVTHRDVVQELERLSFINSDIGRCRAWVRLALNDGLLECYLTSLLREGSNLSSYYQPGAL
LLDPEDREVLLTLLQGLASMTFQLSYKSAVLNEWTNTPLVLAGLCPPTPADEHLLGPKRK
ESWDTVSQSSGGSGSSDWAQEAIQRESRKEQSEGCETSTPLTSSNLSLNTSGSSQLSSSL
SSDSLLQGQEPRSPEKERWSCETEVIQKAQQNTVTEENGSSSQDLKKEDFDVFMPAPHVL
SDSAKHAVAGKTDISDTDTHQSDAHVTEGSKAGSEKTSAEALQETQEGTAEESKILVKST
RLKVKHAVTETPEMEQKKENRDSSVESPSVSTLPETVETTSDLKDPDTFLPETSAAPSSV
EQPRHAAYRRSASTVSRKTSSDSLYSSCKSTSWISEDDFYKPEETGSSEAYAVIDITQLN
EQVTPTSEPDTLQPPPSVVHRRQNGLPNPFRGLLKLGQLERRSAVGMWWDYYCELSPFEL
RLYVNAEERICYENLSLLRCEDVHLSSGTEGRFRLSFLGKKIYLRAPSPGEAEDWVDRIM
EAISKLRPMMKDEQWEVLQTSSDQEVPSPAPSSPERTISELPDPPQLDWTRHKDPELDAI
KEAVVYQNLEEKGWRSLVLSLSLETLRGYRVQDDSKTPLFSYPIGTIRDVVPDVSLGSPA
FFKILTARDTMTLRAESGEEARGWRSLIRGALDSYLETEDDGAAQGVSSPGGGHGGSVHK
LVQHRLKGDGSLLAHLSEVPKERGLDAQNYKCAGCPRQIGVSLGRARLCEFSGQYYCDSC
HQGDATIIPSRMVHNWDLTTREVSRQAFKLLTQIEHEPLLNLDVLNPDLFDHTDIMANVQ
TLRQKLRFLGDYIRICRSGISKKIQPRLQQRTYLLDNCNVYSVLDLQQIADGHYESYLQS
LIEFGSKHVHNCDLCTQRGFICQICNSDTIIFPFQFDSTSRCNVCKTVFHSSCKAKCPVC
PRCVRIQKYLERDLED
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgaaggtcttacgggtgtggaacgccatgaggtttgtaaagtgggactaact
gaagctagaggagccatgctggccacccaaacacctgagagcggcccagagacaaaagat
gtcaaacagtggatcaaggaaaagattgcactgacgctaaaagccctgcagaagcgttac
atcaccacagacacggcggtcaccagcgaggacctggaggcgaacctgctgtgttgtgct
ttggaggcggctttcatccatggaatcaagagcaagtttatcagatttgatggaggtaat
tcgcgcaaaggaggatcacgaggagcacttcctcaacccgtcttctggagcctgttgaag
actgtcacacacagggatgtagttcaagaactggaacgtttaagcttcataaactcagac
attggtcgctgcagagcatgggttcgcctggctctaaatgatgggcttctggagtgttac
ctgacatcgctgcttcgtgaggggtccaacttgagctcctactaccagcctggggctctt
ctgctggacccggaggatcgtgaggttcttctcaccctgctgcagggcttggcctcgatg
accttccagctctcctataaatcagctgtgctgaatgagtggactaacacaccgctggtc
ctcgcaggcctttgcccccccacgcctgctgacgagcaccttcttggccccaaacgcaag
gagtcatgggacacggtctcacagtcatccggggggtccggaagctcagattgggctcag
gaagcgatccagagggagtcgaggaaagagcagagcgagggatgtgaaacgagcactcca
cttacctcatcaaaccttagtctgaatacgtcaggatcgtctcagctgtcctccagcctg
agctctgatagtctgcttcagggtcaggagcccaggagtcctgaaaaggaacgctggagt
tgtgaaacggaagtcatccagaaagcacaacagaacaccgttacagaagagaacggctcc
tctagtcaggatttgaagaaggaagactttgatgtgttcatgccagctccacacgttctg
agtgactctgccaaacatgctgttgccggaaaaacagacatttctgacacagacacgcat
caatcggatgcacacgtcacagagggatctaaagcgggctcagaaaagacatcagctgaa
gcgttacaggagacacaagaaggaacggcggaagaatccaagattctagttaaaagcaca
agactaaaagttaaacatgcagtcactgagactccagaaatggagcagaagaaagagaac
agagactcatctgttgagtccccttcggtttctactttacccgagactgttgagacgacc
tctgaccttaaagaccctgacacttttcttccagagacctctgctgctcctagttcagtg
gaacaaccccgacatgctgcatacagacgatccgcaagtaccgtcagcaggaaaacatcc
tccgactctctgtattcctcctgtaaatccacatcttggatatcagaggatgacttctac
aaaccagaagaaacgggcagttctgaagcatatgccgtcattgacatcacgcaattgaac
gagcaggtgacgcctacctctgaaccagacaccctccagccaccaccgagtgtagtgcac
cggagacagaacggtcttcctaacccgttcaggggtttgctgaagctgggtcagctggag
cggcgcagtgcggtgggcatgtggtgggattactactgtgagctctctccgtttgagctg
cggctttacgtcaacgcagaggagcgcatctgctacgaaaacctgtccctgctgcgctgc
gaagacgtccacctgtcctccggcaccgagggccgtttccggctctccttcctaggcaaa
aaaatctacctgcgtgccccatctccaggggaggccgaagactgggttgatcgcatcatg
gaggccatcagcaaactacgtcccatgatgaaagacgaacagtgggaggtgctgcaaacg
tccagtgatcaggaagtcccctcgccggcaccctcaagccctgagcgcaccatctcagaa
cttccagatccacctcagttagattggacccgtcataaagacccagaactagatgccata
aaggaagcggtggtctatcagaacttggaggagaagggttggcggtctcttgtgctctcg
ctctccctagagaccctcagaggttaccgggtccaagatgactccaagacgcccctcttc
tcataccccattgggaccattagggatgtggttccagatgtttctctaggcagtcctgcg
ttttttaagattctgactgcgcgggacacgatgacgctgagggcagagagcggcgaggaa
gcccgaggatggaggagcctgatcagaggagcgctcgactcgtatctggagaccgaggat
gatggagcggctcagggtgtctcttcgcccggcggcggccatggagggagtgtccacaaa
ctggttcaacacagactgaagggtgacgggtcattgctggctcacttgtctgaggtccca
aaggagagaggactagacgcgcaaaattacaaatgtgcaggatgccctcggcagatcggt
gtgtctctggggagagccagactctgtgagttctcaggccagtactactgtgattcctgt
caccaaggagacgcaaccatcatcccctcccgcatggtgcacaactgggacctgacaaca
cgtgaggtctcaagacaagcctttaagttgctgactcaaatagagcacgagccgctcctg
aaccttgacgttttgaatcctgacctgtttgatcacactgacatcatggctaatgtgcaa
accctgaggcagaaacttcgtttccttggagactacatccgcatctgccggagcgggatc
agcaaaaaaatccaacccagacttcagcagaggacatatttattggataactgtaatgta
tacagtgtattggacttgcagcagatagcagacgggcactacgaatcttacctgcagtct
ctgattgagtttgggtccaagcacgtgcacaactgtgacctttgcacccagaggggcttt
atatgtcagatctgcaactccgacaccatcatcttcccttttcagtttgacagcacttcc
aggtgtaacgtctgcaagacggtgtttcattcctcctgtaaggccaagtgtccggtctgt
ccacgctgtgttcgaatacaaaagtatttagagagggacttggaggactaa
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