Megalobrama amblycephala (Wuchang bream): 125256049
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Entry
125256049 CDS
T08212
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125256049
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125256049
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LD_cluster2
Motif
Other DBs
NCBI-GeneID:
125256049
NCBI-ProteinID:
XP_048027656
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Position
LG20:complement(4222566..4268010)
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AA seq
1233 aa
AA seq
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MNQNDIEHGGVAVMPKTDLSWIPQLFKKRVCTTFVEDSFSNGGLCQCGSTRDTHPSGALG
DNFSTAIVSHWDSTQHSCEQPTDAFGELEFAGAGKRHSYFLRLSSTTYPSWVFNIMREHW
KLAHPNLVVSVFGGEKRSEVKTWVQEVLRQGLVKAAQSTGAWIISGGLREGLGRCIGEAV
RDYATATSSVTLSKVVLIGIAPWGLVKDHQQLVNPEGSFPAKYFVRNAARNSCSLDNSYK
AFLLVDDGTIGRKGGEVGFRARLEDYISRQRTDSASFDIPVLNMLISGEASMLEALDISL
KNSMPWLVLAGSGGLANLVCDIVENVQSAPMTSTGGAEKEEGTHNMELRERLAEKVMKYF
PSEQEMDKLVDKVLSVYQNKDLISIYDAEQEGADDFDTVMLKVLVQASKKQVSGITNPHA
DELRLAVTWNRVDIAKSELFNGNIDWKYDDLKDFMTDALMNNKPQFVRLFIDHGLNILNY
LTYGQLEDLYNSISDNCQAGKLLQQILNERKDEFSNDQNGRISLYEVSQLLENLLGEVCQ
PFYMSVLNVDTNSTKRKAFKKACQVLQGECSYRKNLCKHPWLCLFIWAVLQNHSEMAIFC
WEMCGESVLTALGGCKLLRELSKQGIETEAKISIKEMGMKLENIAHDVFGMCYQNKASDS
YKLLIRKSNMWGDATCLKMAIAADARVFFSHDGVQSLLSQIWWGDMERGTELWKLALTLI
IPPLCYTNLIKFRNEENAEREKSLTAPPPSATDCHYGETVFSFNDIKQHSEAEQDDSNNI
RRPTKGTPAYGKPKQPFLLSRWRQFWYAPVTTFIGNVLMYFLFLILYAYVLLVDFKPPPP
DGPAPSEYVLYFWVFTMMCEEIHEAITMESKTFAQRLMVYAQDKWNKFDVLAISLFIAGL
CCRMFSWSYSMGRGILCMDYMVFTLRLIHIFAIHRQLGPQIIILGKMIKDAFFFLFFLAV
FLIAYGVANQALLYTYDPSPERAFRRVLYRPYLHIFGHIPVEEIDTDNYWDRDCTDNLTL
INEGKEPCRDTSHNWLVIILLVIFLLVTNILLVNLLIATFSYTFSKVQECSDTYWKFQRY
NLIVEYHSRPNLAPPFIILSHINNFIKRNFCKEPSTKIHHFAIQIKGREANKLVKWENLQ
KENFLAVESKKQRGTDSERLKRTSAKVDGVLKQVRDVDRRLQALEAEVKTQMEFCTSSLQ
WIMDTLSQSSTAKGAKAQPTRKVVVSASLDREK
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacgacattgaacacggtggagtggccgtgatgccgaaaacagatctgagc
tggattccacagttgtttaaaaagagagtgtgcacaacatttgtggaggactctttcagc
aatggcggtctgtgtcagtgtgggtccacgcgagacacgcacccctcaggagccctgggc
gataacttcagcacagccatcgtcagtcactgggacagcacacagcactcctgcgaacag
cccacagatgcctttggagagctggagttcgctggggccggcaagagacacagctatttt
ttgcgtctttccagcaccacatatccttcctgggtcttcaatatcatgagagaacactgg
aaactggcacatcccaacctggtggtgtcagtgtttggtggtgagaaaaggtcagaggtc
aagacctgggtgcaagaggtgctgaggcaggggctggttaaagctgcacagagcacagga
gcatggatcataagcggggggttgagggaaggcctcggcaggtgtataggagaagctgtg
agagattatgccaccgcaacctcttctgtcactctcagtaaagtggttctcattggcatc
gctccctggggccttgtaaaagatcatcaacaactcgtcaaccctgagggaagtttcccc
gcaaagtattttgtcagaaacgcagcgcgcaactcttgctctctggacaatagctacaag
gctttccttctggtggatgatgggaccatagggcgtaaaggtggtgaggtcggcttcaga
gcccgtctggaggattacatttcacgtcagcgcacagacagtgcaagctttgacattcct
gttctgaatatgttgatatctggagaagcatcaatgctggaggcattagatatctctctg
aagaattcaatgccctggttggtcctggctggttcgggggggcttgccaatcttgtgtgc
gacatcgtggagaacgtgcaatctgcaccgatgacctcaactggaggagcagagaaggag
gaagggactcacaacatggaacttagagaacgattggcggagaaagtaatgaaatacttt
ccttcagagcaagagatggacaaacttgttgacaaggttttaagtgtctaccaaaacaaa
gacctcatctccatttatgacgcggaacaggaaggagcagatgattttgacactgtgatg
cttaaagtgcttgttcaagcaagtaaaaaacaggtttcgggcattactaatccccatgct
gatgagttgaggcttgctgtaacatggaacagagtggacattgccaagagtgaactcttc
aatggaaacatcgactggaagtatgacgacctgaaagatttcatgactgatgcactgatg
aacaataaaccacagtttgtgcgtctcttcattgaccacggtctgaacattttgaactac
ctgacttacggccaactggaggatctttacaactccatctctgacaactgccaggccggc
aaactgctgcagcagatcctgaatgagcgcaaggatgagttcagcaatgatcagaatggc
cgcattagcctttatgaggtgtcccaactgctggagaatctgttaggggaggtatgccag
cctttctacatgtctgtactcaatgtggacacaaattcaaccaaaagaaaagcttttaag
aaagcatgccaggtcctgcagggggaatgtagctatcggaagaacttgtgtaagcacccg
tggttatgtctcttcatctgggcagtgctgcagaaccacagtgagatggccatcttctgc
tgggaaatgtgtggcgagtcggttctgacagctctgggaggatgtaaactgttgagggag
ctgtctaaacaggggattgagacagaggccaagatttccattaaggagatgggcatgaag
ttggagaatatagctcacgatgtgtttggcatgtgctaccaaaacaaagcaagtgattcc
tataagctactgattcgcaagtctaatatgtggggtgatgccacctgtctgaagatggcc
attgctgctgacgcccgtgttttcttcagccacgatggagtacagtcgctgctgtctcag
atctggtggggtgacatggaaagaggaactgagctctggaaactggcgctgactttgatc
attcctcctctctgctacaccaacctcatcaaattcaggaatgaggaaaacgcagaaagg
gagaaatcactgacggcacctccaccctcagcaacagactgccactatggagagactgtc
ttctccttcaatgacatcaaacagcacagtgaagccgagcaagatgactcaaataatatc
agacgaccaacaaaaggtactcctgcatacggcaaacctaagcagccctttctgttgtcc
cgctggaggcagttctggtacgctcctgtcactacatttatcggcaacgttctgatgtac
ttcctcttcctgattctgtatgcctacgtgctattggttgacttcaaaccgcctcctcct
gatggccctgccccttccgagtatgtgctgtatttctgggttttcactatgatgtgtgag
gagattcacgaggcaatcactatggaaagtaaaacatttgctcagcggttgatggtgtat
gctcaggataagtggaataagtttgatgttcttgccatctccctcttcattgctggtttg
tgctgcaggatgttcagttggtcgtacagcatgggacgtggtatactgtgtatggactac
atggtcttcacgctccgactcattcacattttcgccattcacagacagctgggtccccaa
atcatcatacttggcaaaatgataaaggatgcgttcttcttcttattctttctggcggtg
tttctgatcgcgtatggagtggccaatcaagcgctgctatatacgtacgatccaagccct
gagagagcatttcgacgagtattgtacagaccatatttgcatatatttggacacattcct
gtggaagaaattgacactgacaactattgggatcgggactgcaccgataatctgacattg
attaatgaagggaaagagccatgtagagacaccagccacaactggcttgtgatcattttg
ctggtcatcttcctactggtcaccaacatcctacttgtcaacctgctcattgccacattc
agctataccttctctaaggttcaggagtgcagtgacacatactggaagtttcagcgatat
aatctaatagtggagtatcattctcgtccaaatctcgctccacccttcatcatcctatcc
catatcaacaactttatcaaaagaaacttctgcaaagagccatccaccaaaatccatcat
tttgccattcaaataaagggtagagaagctaacaaactggtgaaatgggagaacttgcag
aaggagaacttcctggctgtggagagcaaaaaacaaagagggaccgactctgagaggctg
aaacgcaccagtgctaaggtggatggtgtcctcaaacaggtcagagatgttgaccgcaga
ctgcaagcactagaagcagaagtaaagacacagatggagttctgtacatcttctcttcag
tggattatggacacactgtctcaaagcagtacagcgaagggcgctaaagctcaacctaca
cgcaaagtagttgtttcagcctcccttgaccgtgagaaatga
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