Megalobrama amblycephala (Wuchang bream): 125259727
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Entry
125259727 CDS
T08212
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125259727
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125259727
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Cadherin_C_2
Cadherin_4
BppU_N
Motif
Other DBs
NCBI-GeneID:
125259727
NCBI-ProteinID:
XP_048033572
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All DBs
Position
LG2:43712073..43715556
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AA seq
828 aa
AA seq
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MRHRRIREWEWAALWLFAFSLLWNTVGAQIRYTIPEELKEGSIVGNIAKDLGFDISDIAE
RKLRLASESNRQYFSVDSGKGDLVVNGRIDRETLCGQSASCLMPLQIVIENPLQMHKVEI
EIQDINDNAPNFHNKDGVLNISELTAPGTRFTLESAEDLDVGSNSLKSYSLSNNNFFRLN
LKTLKNGRQIPELVLDKSLDREKQAVHKLILTALDGGNPVKSGTSLLQIIVQDFNDNEPT
FEVAAYKASVLESAAVGSSVIKIKATDLDEGPNAEIRYSFGAHTPELVRNVFSVNAETGE
ITVIGKLDYETTKSYTFDVCAKDKGNPQLEGQSSVQIDIIDENDNPPEIILTSLPSPVPE
NATVGTVVALITVKDLDSGNNGKVEPIVSPDVPFKLKPTFDSHYSLITDSFLDREVHSEY
SVEILAMDSGVPPLKTVKTVNVKVLDVNDNPPVFSQSSYNVYINENNLAGVSLFSVSASD
FDHNKNALLTYSILDLSSNHVPASSYFYINSENGTIYSMSSFDYEKTKLISIVVQAKDHG
SPSLSSNATVHVFILDRNDNAPAVIYPSTSMGSVSHQRMPRSAKAGHLVTKVTAVDADSG
HNAWLFYRLAEATDASLFSVNLHTGEVRTKRAVSEQDDSSQRLMIEIKDNGEPIQSTTVT
VDILIEDGFHEPISDYREKTIEPNKKNGKITLYLIISLASVSLLCLMTFFILLVKCARGS
RGGSSCCIRRTDSEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEFS
DLTLVKPSSTTNFTDTLNVLDASLPDSAWTFESQQVRRRIIDYLSINR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacaggaggatcagagaatgggaatgggcagcgctttggctgttcgctttctct
ctattgtggaatacagttggagctcagattcgctacacaatacctgaagagttaaaggaa
ggatctatcgttgggaatatcgcgaaggatcttggttttgacatctcagatatcgccgag
cgtaagttgcggttagcatctgagtcaaatagacagtatttcagtgtggattcagggaag
ggtgatctggtagttaatggcagaatagacagagaaacgctctgtggacaaagcgccagt
tgtctgatgccactgcagatcgttattgagaatccattacagatgcacaaggtagagata
gaaatacaagacattaatgacaatgcaccgaacttccacaataaagatggcgtattaaac
atttctgaattgactgctccaggaactcgatttacccttgaaagtgccgaggacctcgat
gttggcagcaatagcttaaagtcctattcactgagcaataacaatttcttccgtttaaat
ttaaagacgcttaaaaacggaaggcaaataccagagcttgtgcttgataaatcactagat
agagagaaacaggccgttcacaagctaatattaacagctctagatggcggtaatccggta
aaatctggtacatctttactgcaaataattgttcaggattttaatgacaacgaaccaaca
tttgaagttgctgcatataaagcatctgttctagaaagcgccgctgttggttcaagtgtg
atcaaaataaaagccactgatttggatgaaggtcctaatgctgaaatacggtattcattc
ggtgcgcacacgcctgaactcgtaagaaatgtttttagtgtgaacgctgaaaccggtgaa
ataacagtcattggtaaactagattacgagactaccaaatcatatacatttgatgtctgc
gctaaagacaaagggaatccacagctcgaaggccagtcatcggttcagatagatatcata
gatgagaatgacaatcctccagagattatactgacatctttaccgagcccagttcctgaa
aatgcaacggtgggaactgtggtggctttgattaccgtcaaggatttggattctggtaat
aatggcaaagttgagccaattgtctctccggatgttccatttaaattaaaaccaactttt
gatagccattattcactgataactgattctttcttagaccgtgaggttcattcagaatat
agtgtagaaatactggccatggactccggtgtaccacccttaaaaactgtgaagactgta
aatgtgaaagtgcttgacgtgaatgacaaccctccagtattctcacagtcttcatataat
gtttatataaacgaaaataatctggcaggtgtttcattgttttctgtgtctgcgtctgat
tttgaccataataagaacgctctactcacttactcgattttggatttaagttcaaatcac
gttccagcatcatcttatttttatataaattctgagaacggaactatttacagcatgagc
tcatttgattatgagaaaacgaaattaatcagcattgtagttcaggctaaagatcatggc
tctccatctctgagcagtaacgctacagttcatgtgtttattctggaccggaacgataac
gcacctgctgtcatttacccgtccacatccatggggtctgtctctcatcagaggatgccc
cgttctgctaaagcaggacatctcgttactaaggtaacagcagtggacgcggactcgggt
cataacgcctggctcttctacaggctcgcggaggccacggacgcgtcactgttcagtgtg
aatttacatacgggagaggtgaggactaaacgcgctgtttcagagcaggatgactcctct
cagagactgatgatagagataaaggataatggagaaccgatccagtccaccacagtcaca
gtggatatactgatagaggacgggtttcatgagcccatctcagactatcgtgagaaaact
atcgagcccaacaagaaaaatggcaaaatcacattatatctgatcatctctttggcttct
gtgtccttgttgtgtctgatgacgtttttcatcttattggtgaaatgtgcgcgaggcagt
agaggcggctcaagctgctgtatcaggagaactgattctgaatacaagaaccccaacaga
aacctgcagatccagctcaacactgacgggcccattaagtatgtggaggttctgggagga
gacatgatgtctcagagtcagtcctttggctcctatctctctccaatgtctgaattcagt
gatctcaccctcgttaagcccagcagcaccacaaactttacagacacgctaaacgtgctt
gatgcgtcattaccagacagcgcgtggacgttcgagagccaacaggtgagacgcagaata
attgattacctcagcatcaatagataa
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