Megalobrama amblycephala (Wuchang bream): 125261120
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Entry
125261120 CDS
T08212
Symbol
trpc3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125261120 (trpc3)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125261120 (trpc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
125261120
NCBI-ProteinID:
XP_048035670
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MSMKGRGSKYQKRVSFSEDEDEQCWKEENGGLDAHHLTSVQTVRDSSGYYRYNMKSSDTF
PQRRMTLPREKGRRQAIRGPAFMFNARGSSLTAEEERFLDAAEYGNIPVVRKMLEESPTL
NVNCVDYMGQNGLQLAVGNEHLEVTELLLRRDNLARVGDALLLAISKGYIRIVEALLGHP
SFASDERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIE
RPHDYFCKCADCMEKQRKDSFSHSRSRINAYRGLASPAYLSLSSEDPVLTALELSNELAK
LANIEKEFKDKKNRNKETSQHTGFFLNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGD
ISAELEEGQHHRSLLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTTAVKCL
VVLVVALGLPLLAVGYWFAPCSRLGKMLRSPFMKFVAHAASFIIFLCLLVFNASDRFEGI
TTLPNVTVTDYPLQIFRVKTTQFSWTEILIMVWVAGMMWSECKELWTEGPREYVMQLWNV
LDFGMLSIFIAAFTARFFAFMQAMKAQEYVDENIHAPDLSLVTLPPDVRYYTYARDKWLP
SDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAF
MIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLY
GIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIVP
SPKSFYLCVKRLINLLRCRRRRLKKDVELGMDNSKSRLNLFTQSSMKMTDSHSFNSILNQ
PTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEEKSQATEELSI
LIQKLSDKLNPRPVHPH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaaggcagaggatccaaataccagaaaagagtgtcgttttctgaggatgaa
gatgagcagtgctggaaagaggagaacggcggtctggacgcacatcacctgacatccgtc
cagacggtccgagactcttcagggtattaccgctacaacatgaaatcctcggatacgttc
ccccaacgcaggatgaccctaccgcgggaaaagggccgcaggcaggcgattcgcggtccg
gcgttcatgttcaacgctcggggcagcagcctcacggcggaggaagaacgctttctagac
gcagcggagtacggcaacatcccagtggtccgaaagatgctggaagaatctcccacgctc
aacgtgaactgcgtcgactacatgggacagaacggactgcagttggccgtcgggaacgaa
cacctggaggtcaccgagctgctcctgcggcgagacaacctggcccgtgtcggggacgcg
ctcctgctggccatttccaaaggttacatacgtatcgtggaggccctgctgggacatccg
tccttcgcgagcgacgaacgactgacccgcagcccctgcgagctgcaggacgacgacttc
tactcgtacgacgaggacggcacgcggttctcgcccgatatcacgcctatcatcttggcc
gcccactgccagaaatacgaggtggtgcacatgctgctgatgaagggcgccaggatcgag
cggccgcacgactacttctgcaagtgcgccgactgcatggagaagcagaggaaggactcg
ttcagccactcgcgctcgaggataaatgcgtatcgtggactcgccagcccggcgtatctc
tctctgtccagcgaggaccccgtactgaccgcgctggagctgagcaacgagctcgccaaa
ctcgccaacatcgaaaaggagtttaaggataaaaagaaccgtaataaagagacatctcag
cacactggcttctttctgaatgactacaggaagctgtctatgcagtgtaaagactttgtg
gttggagttttggatctgtgcagggacacggaggaggtggaggccatcttgaatggagat
atatccgccgagctggaggaaggccagcatcatcgctctctgctcagtcgagtcaaactg
gccattaaatacgaggttaagaagtttgtggctcatccgaactgtcagcagcagttgttg
acgatctggtatgagaatctgtctggtcttcgggagcaaaccactgccgtcaagtgtctg
gtggttttggtcgtggcgctgggactccctctgctggctgtggggtattggttcgccccg
tgcagtaggcttggtaaaatgctacgcagtccttttatgaagtttgttgctcacgcggcc
tcctttatcatcttcctgtgtctactggtgttcaatgcgtccgatcggtttgaaggcatc
accacccttcccaacgtcaccgtaaccgactacccgctgcagatcttcagagtcaagacc
acacagttctcgtggacagaaatactgatcatggtctgggtagcaggaatgatgtggtcg
gagtgtaaagagctgtggacggaggggccgagggaatacgtcatgcagctctggaacgtt
ctggatttcggcatgctctccatcttcatcgcagcgttcaccgcccggtttttcgccttc
atgcaggccatgaaagcccaggagtatgtggatgagaatatccacgctccagacctgtcg
ctggtcacgctgccgccggacgtcagatattacacctacgcgagagacaagtggctcccg
tcggatcctcagctgatctccgagggtctgtacgccatcgccgtggtcctgagcttctcc
cggatcgcctacatcctgccggccaacgagagcttcgggccgctgcagatctcgctggga
cgaacggtgaaggacatcttcaagttcatggtcctcttcatcatggtcttcctcgcattc
atgatcggcatgttcatcctctactcctactatctgggggcaaaggttaaccccgccttc
accacggttgaggagagtttcaaaacgctcttctggtccatattcgggctgtctgaagtg
tcctctgtggttctgaaatacgatcataaatttatcgagaacatcggctatgtgctgtac
gggatctacaacgttaccatggtggtggttctgctcaacatgctcatcgccatgatcaac
agctcgtaccaggagatagaggacgatgcagatgtggagtggaagttcgcccgctctaaa
ctctggctgtcgtattttgacaacggaaagactctcccgcctccgttcagcatcgttccc
agcccgaagtccttctatctgtgtgtgaagagactgatcaacctgctgcgctgccgccgc
cgccgcctgaagaaggacgtggagctgggcatggacaactccaaatccagactgaacctc
ttcactcagtccagcatgaagatgacagattcacacagcttcaacagcatcttaaaccaa
cccacacgctatcagcaaatcatgaagcgtctgatcaaacgctacgttctgaaagcacaa
gtggacaaagagaacgatgaagtgaatgaaggtgagctgaaggagataaagcaggacatc
tccagcctgagatatgaactgctggaggagaagtctcaggccacagaagagctgtcaatc
ctcattcagaaactcagtgacaaactcaacccacgacccgtccatccgcactga
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