Megalobrama amblycephala (Wuchang bream): 125262719
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Entry
125262719 CDS
T08212
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125262719 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125262719 (smg6)
03032 DNA replication proteins [BR:
mamb03032
]
125262719 (smg6)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125262719 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
125262719 (smg6)
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
125262719 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
125262719
NCBI-ProteinID:
XP_048037522
LinkDB
All DBs
Position
LG2:complement(48487541..48506943)
Genome browser
AA seq
1585 aa
AA seq
DB search
MAFWSYRVAVCLCLVLTKMADELDRVRISAAELRAEASNFTTHSDSIKELREEGKKQRQR
DSKRPDLQWYKPGSGHPRRHKDSAEGVGSDPVHPPEDCGFGNDGKMPDGSPTSPGCSHIP
GIDSGDFPNDGQPETNHNTKGHVGSKNHQLVDGNAVKSIEGAGTPRSPKQSRKMRKPDRE
IYQPGGRRTQGNKETGASKELDGDRRREEEVGGKSVESLNKSEKEEKRRNRRGKDGRKKQ
ESKGSADSPSANKNENNVENIIGNISKLQLESEEGRDGGGQDGTNRRKPSGEGRRTQAGE
GNGGIGEDKKKERGNGKFKAGREKGNNQVSAKKEEGEGGVKVSEAAQPEGKRQRNVGAKE
VSHNQNMNHEKQTGNRPKERGKPFERTDSNRVNSSSKRYSQSDIRRPRNRTYSTSSASSG
TSMDGLAEAERLRGEGQQLSARTAERTVGQREFVRGSQARPRRRTARTLSSTDSLEENEA
WEREDRRGRVADEAKSTHRGPEVGGRGQRAPAPCGRGGILRVSLDKHSSEEQASRKNPRG
RGRGILVLPAHTDLTLTPEPGPQHGGMRGGMGLGRGRGGRGGGTRRLWDPNNPDKKPALV
SSQQSQHASLQQALYLQQGGCGPLHFLDTDDETAGSPPVRQGEYSPNQQAAAMAYYKFQN
SDNPYCYPLPANSPNTPPRYPFPYHIPYQIPGSNGIYPTSAMPPYYGPYGQGGPGYPSPA
GSSLTPEEAEVQTRGELGKLLRLADTQELQLSNLLSRERLSPEGLERMAQLRAELLTLYE
RVILTDIEFSDSQNLDQALWKNVFYQVIERFRQLLKDQTSDTAPQIKTMLMNILEEGAVF
FDSLLQKLQTVFQFKLEDYMDCMAIRARPLRKTVKYALISAQRCMICQGDIARYREQASD
SANYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKE
SLMSLFEEAKRKADQIEHRRKQDSDGGAHGSRGHAGGRRGEDASRVEIWIRPSGNPGTSR
PKGSESGKDSEQDGELGTLSASDLNKRFILSFLHTHGKLFTKVGMESFPAVASRVLQEFR
ALLQHSPSPLGSTRMLQIITINMFTIHNAQIRAERQGETRSVLEEQTISLGLAMFGLLVQ
RCTELLKETPAEPIPAEELGEFDEMDDEEGMVRVSAFPPDLRELLPSMKVWSDWMLGHPD
KWNPPPCSMQGSPDVWQCLADLCNSFSRVYHGEVLLYKADADGEGDEELRVLQLEEDKML
SGFVPLLAAPQEACYIDQATDAAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYISMA
TPLSPSASAENKMKTQEQEDDVIIEESSLSASEGEIDGEMEGDGSEDDIRELRARHHALT
HKLAQQQKRRDKIQAVLQTGGQLEIEVRPFYLVPDTNGFIDHLEGLRKLLACGTYILVVP
LIVITELDGLAKGQDSREGISNGAHARQVQERAKAAVMFLEKAFESRDPCIRALTSRGNT
LESIAFRSEDTSGQKGNNDDVILSCCLHYCQDKAKDFMPAEKNGPVRLRREVVLLTDDRN
LRVKALTRNVPVRDIPAFLIWAKVG
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggctttttggtcttaccgagtcgccgtgtgtttgtgtttggttctgacgaaaatggcg
gacgagctggatagagtacgcatttcagccgcggagctacgagcagaagcgtcgaatttc
acaacacacagcgacagtataaaagaattgagagaggagggtaaaaagcaacggcaacga
gacagtaaacgtccagacctgcagtggtacaaacctggttctggccatccacgcagacat
aaggacagcgcagaaggcgtcggctcagaccctgtgcacccaccggaagattgtggtttt
ggtaatgacggcaaaatgcctgacggctcacctaccagtcctggatgctctcacatccct
ggtatagatagtggagactttccaaatgacggtcagcctgaaacgaatcacaacactaaa
ggacacgttggcagcaagaaccaccaacttgtggatggaaatgctgttaaaagcattgaa
ggtgctggtacgccaaggtccccgaagcagtcacgaaagatgcgaaagccagaccgtgag
atatatcagccaggggggcgaaggactcaaggaaacaaagagaccggggcgagcaaagaa
ttagatggggatcgaagaagagaggaagaagtgggtggtaaatctgttgaatcacttaat
aagagtgagaaagaggaaaaacgtagaaacaggcgagggaaagatggcaggaaaaagcaa
gagtccaaaggaagtgcagactcaccctctgcgaacaaaaatgagaataatgtcgagaat
atcattggtaacatcagtaaactccaactagagtctgaggaaggtagagatggaggtggg
caggatggtacaaaccggagaaaacctagtggggaaggacgaagaacccaagcaggtgaa
gggaatggagggatcggagaagacaaaaaaaaggagaggggcaacggaaaattcaaagcc
ggaagggagaaaggtaacaaccaggtctctgccaagaaagaggaaggggagggaggagtg
aaagtttcagaggcagcccaacctgaaggaaaaaggcagaggaatgttggcgcaaaggaa
gtgagccataaccagaacatgaaccatgaaaaacaaacagggaacaggccgaaagagaga
gggaaaccatttgagagaaccgattcaaaccgagtcaactcatcctcaaagcgatactct
caatcagacatccgacgacctcgaaaccgcacatacagcacgagttcggccagtagcggg
actagtatggacggtctggctgaagctgagagacttagaggagagggtcagcagttgtcg
gcacgcactgcggagaggaccgtcggacagagggagtttgtccgagggagccaggcccgc
ccgaggagacggacagcccggaccttgtcctccacagattcgctggaggaaaatgaggcg
tgggagcgagaagatagaagaggccgtgttgctgatgaagccaagagcacccacaggggt
cccgaagtgggcggaagaggccaaagagcgcctgctccttgtggtcgaggaggaattttg
agagtttctttggacaagcattcaagtgaagaacaagcgagccgaaaaaaccctagaggt
cgtgggaggggcatcctagtgcttcctgcccacacggatctaactttaacccctgagcct
gggcctcagcatggaggaatgagaggaggaatgggtctgggccgaggaagaggtggccgt
ggaggagggacaagacgactttgggacccgaataacccggataagaaaccagcgctggtc
tcaagtcagcaatcccagcatgcatctctccagcaggctttgtacttgcagcagggtgga
tgcgggccgctgcacttcctggatactgatgacgagactgcaggaagtcctcctgtccgc
cagggggagtattctccaaaccagcaagctgctgcgatggcttactacaaattccagaat
tctgacaacccctactgttatccgttaccggccaattcaccgaacaccccgccacgctat
cctttcccatatcatattccctaccaaattcctggctctaatgggatctatcccacctct
gctatgccaccttattatggaccctatgggcaaggtgggccaggttatccctctccagcg
ggatctagtctcactccagaagaagcagaagtgcagaccagaggagagctgggaaagttg
cttcggctggctgacacgcaggaactccaactcagtaacctgctgtcccgggaacgactg
agcccagagggactggagagaatggcccagctcagggctgaactcctgacgttatacgag
cgggtgattttgacagacatcgagttctccgactctcaaaacctagatcaggccctgtgg
aaaaatgtgttttaccaggtgatagagaggtttaggcagctactgaaagaccagacctca
gacactgccccacagatcaaaaccatgctgatgaacattctggaagagggggcagtattc
tttgattcacttctacagaagttgcagacagtgtttcagttcaagctggaagactatatg
gactgcatggctatacgagcaagacctcttcgcaagacggtcaagtatgctctgatcagt
gcccagcgctgcatgatctgtcagggtgatatcgcacgatatcgtgaacaggctagtgac
tctgctaactatggaaaggcccgcagttggtatctaaaagctcagcagattgctccgaaa
aacggacgaccctacaaccagctggctcttctagcagtgtacacgaagcgaaagctggat
gctgtatactattacatgcgtagtctagccgccagtaacccgatcctcacagccaaagag
agcctgatgagtttgtttgaggaagccaagcgcaaggctgaccagattgaacatagacga
aagcaggattcagatggaggtgctcatggttccagaggtcatgcaggtgggcgtcgtggc
gaggacgcctcccgtgtggagatctggatacgtccgagtgggaatccgggcacttctcgt
ccaaaaggcagtgaatcgggaaaggactctgagcaggatggagaactgggaactttgagt
gccagtgatctcaacaagaggtttattttgagtttcctacacactcatggaaagctcttc
actaaagttgggatggagagttttcctgctgtagccagtcgagtgttgcaggagttccgg
gcgctcctccagcacagcccctcccccctcggcagcacacgcatgctgcagatcatcaca
attaacatgttcaccatccataacgcacagattagagctgaacggcagggtgaaactcgg
tccgtattggaggagcagaccatatccctaggtttagccatgtttggtctccttgtccaa
cgttgcactgaactcctgaaggagacgcctgctgagcctatcccagcagaagaactgggg
gagtttgatgagatggatgatgaggaggggatggtacgggtgtccgccttccctcccgac
ctcagagagctgctgcccagcatgaaggtctggtccgactggatgctcggacacccagac
aagtggaaccctcctccctgcagtatgcagggtagtccagatgtgtggcagtgtcttgca
gatctgtgcaactctttctcacgcgtgtatcatggtgaggttctgctgtataaagctgat
gcagatggagaaggagacgaggagctcagagtcctgcagttggaggaggacaaaatgctc
tctggctttgtcccgctactcgctgccccacaggaagcatgctacattgaccaagcaaca
gatgcggctatagccgctgactgtaagagagtgacggttctgaagtacttcctggaagct
ctgtgcgggcaagaagagccgctgctggcttttaagggaggaaagtacatttccatggca
acacctctttcacccagcgcaagcgccgagaacaagatgaaaacacaagaacaggaggat
gatgtcattatagaggaatcctctctctctgcatcggaaggggagatcgatggagaaatg
gaaggagacggaagtgaggatgatatcagagagctaagggcacggcatcacgctcttacg
cacaagctggctcagcagcagaaacgcagggacaagatacaggctgtcctgcagacgggt
gggcagctggagattgaggtcaggccattctatctggtccctgacacaaacggctttata
gatcatctggagggcctgaggaagcttctggcctgcgggacatacattctggttgtgcct
ctcatcgtgatcacagagttggacggtctggctaaagggcaggacagtcgtgaggggatc
agtaatggtgcccatgcccgacaggtgcaggagagagccaaagcagcggtcatgtttctg
gagaaagccttcgagtctagagatccctgcatcagagcgctcaccagcagaggaaacaca
ctggagtccatcgccttccgcagtgaggacacttctggacaaaagggcaacaacgatgat
gtcatcctgtcctgctgtctacactactgtcaggacaaagccaaggacttcatgcctgct
gagaaaaatgggccggtgcggttgcgcagggaggtggtcttgctcacggacgaccgcaac
ctgcgagtcaaagctctcacacgcaacgttccggtccgagacatccccgcgttcctgatc
tgggctaaagtaggctga
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