Megalobrama amblycephala (Wuchang bream): 125268882
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Entry
125268882 CDS
T08212
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04620
Toll-like receptor signaling pathway
mamb04621
NOD-like receptor signaling pathway
mamb04622
RIG-I-like receptor signaling pathway
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125268882 (traf3)
04621 NOD-like receptor signaling pathway
125268882 (traf3)
04622 RIG-I-like receptor signaling pathway
125268882 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125268882 (traf3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Crescentin
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
EzrA
RING_XB3-XBAT31
CENP-K
BLOC1_2
zf-RING_4
zf-TRAF_2
Exonuc_VII_L
FapA
ATG16
Motif
Other DBs
NCBI-GeneID:
125268882
NCBI-ProteinID:
XP_048047439
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All DBs
Position
LG5:complement(25103766..25119623)
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AA seq
573 aa
AA seq
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MSAGRNVEQQIALQQRPPSLAMSSMAQRPRPEPGFLPIHGGFRDRFVTTPEPKYCCEACR
LVLCIPRQTECGHRFCESCITDLLSKPNPVCPADLEPLFEDKIFRDVCCNREIMALKVYC
RSEKNGCKEQMSLQRVMDHLEVCPYFEVPCPLGKCKEKMMRKDMPEHLSRKCKHREITCE
FCNHKMALTELQKHKETVCPAFPVACPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRFG
CTYKGLNQEMREHETSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEV
ETQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRPLRSMREEVEALRGSVE
SMRSVVSSLDSGRVGSGSGSHTLGSLEQQLSRHDDMMSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPHSSSFRRPTGEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtccgccatctctt
gctatgtcctccatggcccagcggcccaggcccgagccgggcttcttgcccattcacgga
ggcttcagggaccgctttgtcacgacacctgagccgaagtattgctgcgaggcctgcagg
ctagtgctctgtataccgcggcaaactgagtgtggacatcgcttctgcgagagctgcatc
acagacttgctcagtaagcctaacccagtgtgtccagctgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaatagggaaattatggctctgaaggtctactgt
cgaagtgagaaaaatggatgtaaagaacagatgagtttacaacgggtcatggaccacttg
gaagtttgtccgtactttgaggtgccatgccctttgggaaagtgtaaggagaagatgatg
aggaaagacatgcccgagcacttgagccgcaaatgcaaacacagagagatcacctgtgaa
ttctgcaatcataagatggccctcactgagttacagaaacacaaagaaacagtctgtcct
gcatttcctgtagcatgccctaatcactgctcgttttcttccattctaagaagtgagcta
tccagtcaccagcatgactgtccaaaggcccaggtgacctgctccttcattcgcttcggt
tgcacctataaggggctgaatcaagagatgagagaacatgagaccagttttgcatccgag
cacttgagaatgatggcagtcaggaacaccacactagaggccaaggtcgaggacgttaag
agcgagctgatggagcgttataaagttctgcccagcctcagcagtcgtcttgcagaggta
gaaacacagtatgaagagatgagagaaaagaacaggcagctggagcagaagctagtcagc
atgcagatgttgatgagctctcactcagagaaactgcttgaggttgagatggagctgcgg
gagcttcgtcctctgcgatctatgagggaagaggtggaggctctgagagggtctgtggag
agcatgcgttcagttgtatcttctctcgactcgggtcgcgttggttccggttctggttct
cacaccctgggctccttagagcagcagctctcacgtcacgatgacatgatgagtgtccat
gacatccggctggcagagatggacctgaagctgcaggtgctagagacggccagcttcaat
ggtacactcatttggaagatccgtgactacaaaaggcggaaacaggaagccgtggcctcc
aaaaccctctcgctctacagccagcccttctacacgggctatttcggctataagatgtgt
gcccgcgtttatctcaatggggatggaatgggaaaaggtacacatctatcgctcttcttc
gtggtcatgcgcggggaatatgacgccttgctgccttggccatttaaacagaaagtaacg
ttaatgctaatggaccaggggccggcacggaaacacttaggtgatgccttcaaaccagac
ccccatagcagtagctttcgccggcccactggggaaatgaacattgcctcaggctgtccg
ctcttcgtggctcagactgtcctggagaacggaacctacatcaaagacgataccatcttc
atcaaagtgactgtagacacctctgacctcccggacccctga
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