Megalobrama amblycephala (Wuchang bream): 125271762
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Entry
125271762 CDS
T08212
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125271762 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125271762 (nthl1)
Enzymes [BR:
mamb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
125271762 (nthl1)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125271762 (nthl1)
Prokaryotic type
125271762 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
125271762
NCBI-ProteinID:
XP_048051962
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All DBs
Position
LG7:14437560..14443973
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AA seq
448 aa
AA seq
DB search
MSAPMRSLCVYMFRRFTVRMNSPYFADSTAVLDTSASETMGKSAVNKGGIRRLRSRMTQG
LKSEDDPPKVKAEVHEQSISDAPLQTHAQTPAETVSSCKDTAKVKEEAAPLMSPRKSRRG
RLKVEYEEEGVELKRERWEPCDWRTQLSFIREMRSKRDAPVDQMGAEKCYDAEAPPEVRR
YQVLISLMLSSQTKDHVTAGAMQRLREHDLSVNAILNMDEETLGKLIYPVGFWRTKVKYI
KQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNRL
GWTRKETKSPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPLCSMCLNQHTCPSA
HRSSPSKKLKSSLASPTPQVKEEPADASRSRCPSENRKHTAQQEVSGNKGQEKPTPKDTP
SLLRQRNRRKWKAGAPPSGQTSVFTPDS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgccaatgcgaagtttatgtgtttatatgttccgtcgttttactgtaagaatg
aactctccatatttcgccgattcaacagctgtattagacacttctgcatccgagactatg
gggaaaagtgctgtaaataaaggaggaatccgtagattgagatccagaatgactcaaggg
ctcaaatcagaagatgatcctccaaaagtgaaagcagaagttcacgagcagagtatttca
gatgctccactgcagacacatgcacagactcctgcagagactgtgtcaagttgcaaagac
acagcaaaagtgaaggaagaagcagcccctctgatgtcacctaggaaatcaaggcggggc
cgtttgaaggtggagtatgaggaggaaggggtggagctaaagagggagcgctgggagccg
tgtgattggagaacacagctgtcgtttatcagggaaatgaggagcaaacgggatgctcct
gtggaccaaatgggagcagaaaaatgctacgacgcagaggccccgcctgaggtgcgtcgt
tatcaggtgctgatctccttaatgttgtccagtcaaacgaaagatcatgtgacggctggc
gctatgcagagattacgtgagcatgacctcagcgtgaacgccatactcaacatggacgag
gagactctgggcaaactcatctacccagtgggcttctggaggacaaaggtgaagtacatc
aaacaggccacggctctgatccagcaggagtttggcggagacattcctaacacagtggag
ggtctgatacgtctgccgggcgtcggccctaagatggcccacctggccatggacatcgcc
tggaaccaggtttcaggcatcggcgtggacacccacgtccaccgaatctcaaacaggctc
ggatggaccaggaaagagaccaaatcaccagaggagactcggagagctctcgaggagtgg
ttaccacgagacctgtggagtgagatcaactggttgctggttggtttcgggcagcaggtg
tgtttacctgtcgggccgctgtgctccatgtgtctgaatcagcacacctgtccctccgca
caccgatcctctcccagcaagaagctcaaatccagtctagcatctccaacaccacaggtt
aaagaagagccggcggacgcatcccggtccaggtgcccctctgagaacaggaagcacaca
gcccaacaggaagtgtcaggaaacaagggacaagaaaagccaacaccaaaagacactcca
tccctcctcaggcagagaaacagaaggaagtggaaagcaggagcgccaccatcaggacag
acctctgtctttacaccagacagctga
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