KEGG   Megalobrama amblycephala (Wuchang bream): 125272709
Entry
125272709         CDS       T08212                                 
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082  ATP-dependent chromatin remodeling
mamb04145  Phagosome
mamb04210  Apoptosis
mamb04510  Focal adhesion
mamb04520  Adherens junction
mamb04530  Tight junction
mamb04810  Regulation of actin cytoskeleton
mamb04814  Motor proteins
mamb04820  Cytoskeleton in muscle cells
mamb05100  Bacterial invasion of epithelial cells
mamb05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125272709 (actb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125272709 (actb1)
  09143 Cell growth and death
   04210 Apoptosis
    125272709 (actb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125272709 (actb1)
   04520 Adherens junction
    125272709 (actb1)
   04530 Tight junction
    125272709 (actb1)
  09142 Cell motility
   04814 Motor proteins
    125272709 (actb1)
   04820 Cytoskeleton in muscle cells
    125272709 (actb1)
   04810 Regulation of actin cytoskeleton
    125272709 (actb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125272709 (actb1)
   05100 Bacterial invasion of epithelial cells
    125272709 (actb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mamb03021]
    125272709 (actb1)
   03019 Messenger RNA biogenesis [BR:mamb03019]
    125272709 (actb1)
   03036 Chromosome and associated proteins [BR:mamb03036]
    125272709 (actb1)
   03029 Mitochondrial biogenesis [BR:mamb03029]
    125272709 (actb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mamb04812]
    125272709 (actb1)
   04147 Exosome [BR:mamb04147]
    125272709 (actb1)
Transcription machinery [BR:mamb03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125272709 (actb1)
Messenger RNA biogenesis [BR:mamb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125272709 (actb1)
Chromosome and associated proteins [BR:mamb03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125272709 (actb1)
    NuA4 complex
     125272709 (actb1)
  Chromatin remodeling factors
   BAF complex
    125272709 (actb1)
   PBAF complex
    125272709 (actb1)
   GBAF(ncBAF) complex
    125272709 (actb1)
   SWR1 complex
    125272709 (actb1)
Mitochondrial biogenesis [BR:mamb03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125272709 (actb1)
Cytoskeleton proteins [BR:mamb04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125272709 (actb1)
Exosome [BR:mamb04147]
 Exosomal proteins
  Proteins found in most exosomes
   125272709 (actb1)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125272709
NCBI-ProteinID: XP_048053726
LinkDB
Position
LG7:complement(46206966..46210748)
AA seq 375 aa
MDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgaggaaatcgctgccctggtcgttgacaacggctccggtatgtgcaaagccggt
tttgctggagatgatgcccctcgtgctgtcttcccttccattgttggccgacccaggcat
cagggagtgatggttggcatgggacagaaggactcctatgtgggagatgaggctcagagc
aagagaggtatcctgacccttaagtatcctattgagcacggtattgtgaccaactgggat
gacatggagaagatctggcaccacaccttctacaatgagctgcgtgttgcccctgaggag
caccctgtcctgctcacagaggctcccctgaatcccaaagccaacagggagaagatgaca
cagatcatgtttgagaccttcaacacccctgccatgtatgtggccatccaggctgtgctc
tccctgtatgcttctggtcgtaccactggtatcgtgatggactctggtgatggtgttacc
cacaccgtgcccatctacgagggttatgctcttccccacgccatcctgcgtctggatctg
gctggtcgtgacctgacagactacctgatgaagatcctgaccgagcgtggctacagcttc
accaccacggccgaaagagaaattgtccgtgacatcaaggagaagctgtgctacgtggcc
ctggacttcgagcaggagatgggaactgctgcctcatcttcctccctggagaagagctac
gagctgcctgacgggcaggtcatcaccattggcaatgagcgtttccgttgccctgaggct
ctcttccagccttccttcctgggtatggaatctagcggtatccacgagactaccttcaac
tcaatcatgaagtgtgacgtggacatccgtaaggacctgtatgccaacacagtgctgtct
ggaggtaccaccatgtaccctggcattgctgaccgtatgcagaaggaaatcacctccctt
gctccttccaccatgaagatcaagatcattgctccccctgagcgcaaatactccgtctgg
atcggtggctccatcttggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtccggcccatccatcgtccacaggaagtgcttctaa

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