Megalobrama amblycephala (Wuchang bream): 125273331
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Entry
125273331 CDS
T08212
Symbol
pkp1b
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125273331 (pkp1b)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
125273331 (pkp1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
Motif
Other DBs
NCBI-GeneID:
125273331
NCBI-ProteinID:
XP_048054500
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Position
LG8:330465..345726
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AA seq
786 aa
AA seq
DB search
MRAGPGESLCESSPESNTQQPDGADSWSFTNWTSPVSGGETKAKMMPEPLKSALSLGDVE
DTSLALPSDRELRSAQQRVLEQVHTIKRSKSKYSSKSVSGVASPTISSIAGPESDSVFYD
FKFSPSTSLSGPSFSRGGTMTNGNMQRQNTVRKSTNSRSSSGQRATSSSNRLDRSMYSPT
GTFSAQQRANNQLYSYKATRSAPDLGFQATANGSAGTTQRSQSGRQTFRMEKTYIQPNQP
FGNGTLGRMTNSNQVGTFRTVNRRPSSLQSNGESRLSMIRTGQAKDISGMNAEKLMADMT
MREAVDYLFSPEENYQQYGAAYIQHSTFTDDKAKQEVMTLKGIPPLVNLLSSPSLQVQET
VAAALRNVVFKHQANKEEVQRCGGITQAVQLLSNTNSETQKHLTGLLWNLSSADNLKPDL
LRTALPALTEKVIEPFSASTDDNANTSQAPEVFYNATACLRNLSASKLANRQAMRNCKGL
IDSLMRYTENCVNAGTPDNQSLENCVCILHNLTYQLETEMPSLFTKINALASYARNRSSA
SDAGPIGCFSTQSQKLQQEQSGFDYPVMEDNNPKGAGWLFHSKALQMYLNLLSSSERDAT
LEASCGALQNLTANDGIVSNVLSHTVVQKLNGLKYISPLLQSSNPALQNSAVALLGNLSR
STRTNKVMARQALPQLVGFLNSGLTKSDSSPEYDSTMATALHSAHALMKADPEIGKGLLN
NSLINSLNNMSLNLGLPKSSTAAGVLLHSLWSEKNIQSFLKKQGMNKKFFVNDITSAAFK
SLQVVD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagggcaggtccaggtgagtctctctgtgagtcaagccctgaatcaaacacacagcag
ccagacggagcagatagttggagctttacgaattggacctcacctgtctctggaggagag
acaaaagccaaaatgatgcccgaacctttaaaatcagctctgtcattaggagatgtggag
gacacgtctctcgcgctcccatccgaccgcgagctgagatccgcgcagcagcgagttctg
gagcaggttcacaccatcaagaggagcaagtccaaatacagcagcaaaagtgtgtccgga
gtcgcttcccccaccatttcttcaatcgcaggccccgaaagtgacagtgtgttttacgac
ttcaagttttctcccagcacgtctctcagcggaccctcgttcagcagaggaggaaccatg
acaaatgggaatatgcaaaggcaaaacactgttcgcaagtccaccaactcccgcagctcc
agcggtcaacgggcgactagtagctccaacaggttagatcggtccatgtactcccctacc
ggcaccttctctgcccagcagcgggccaataaccaactgtacagctataaagccacccgc
agcgctccggacctgggcttccaagccaccgcgaacggcagcgccggcactactcaacgc
agccaaagcggccggcagacctttcggatggagaagacctacattcagcctaaccagcct
ttcggcaacggcactctcggaagaatgactaacagcaatcaggtcggcacttttcggaca
gtcaacagacgtccgtcttccctgcagtccaacggagagtcccggttgtctatgatcagg
actggacaagccaaggatatttctgggatgaacgcagagaagcttatggccgatatgacg
atgcgagaggcggtcgactatctgttcagcccggaagaaaactaccagcagtatggcgct
gcttacatccagcacagcaccttcactgatgacaaggccaagcaagaggtgatgaccctg
aagggcattcctccgctggtcaacctgttgagcagccccagccttcaggtccaggagacg
gtggccgctgccctgcgaaacgtggtcttcaaacaccaggccaataaagaggaagtgcag
cgctgcggaggaatcacacaggctgtgcagctgctcagcaatacaaactctgagacacag
aaacacctgacaggtctcctgtggaacctctcctctgctgacaaccttaagcccgatctg
ctccgcactgctctgccagcactcaccgagaaagtcatagagccgttttcagccagcacg
gacgacaacgccaacacaagccaggcaccagaggtcttctacaatgccacggcatgccta
cgcaacctaagcgcctccaaactggcaaaccgacaagccatgcgcaactgcaaaggcctt
atcgactcgctcatgcgctacacggagaactgcgttaacgcagggacaccagataaccag
tctttggagaactgcgtgtgtattctgcacaacctcacctaccagctggagaccgagatg
ccatctctcttcactaaaataaacgcactggccagttacgctcgcaaccgctccagtgca
tcagatgcgggtccaatcggctgcttcagcacccagagccaaaaactgcagcaggagcag
agcggctttgactatcctgtgatggaggacaacaatcctaaaggtgccggctggctcttc
cactctaaagccctgcagatgtacctcaatctgctgagctccagtgaaagagacgccaca
cttgaggccagctgtggagcgctgcagaacctcacggccaatgacggcattgtgtcaaat
gtgttgagtcacacagttgttcagaagcttaacggtcttaagtacatcagtccattgttg
cagtcatccaatcctgcgctacagaacagcgcagtcgctctcctcgggaatctgtccaga
tctacacgtacaaacaaagtcatggcccgtcaggcactaccacagctggttggtttccta
aactcagggctcacgaagagcgattcctcgcctgaatatgacagcaccatggcaacagct
cttcacagcgcacacgccctgatgaaggccgatcctgagatcggcaagggtctgctgaac
aacagcttgatcaactcgctcaacaacatgagtctcaatctgggtctgccaaagtccagc
actgcggcaggagttcttcttcacagcctgtggtcagaaaagaacattcagagttttctt
aaaaagcaaggcatgaataagaagttctttgtgaatgacataacgtcggcagctttcaaa
tctcttcaggtggttgactga
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