KEGG   Megalobrama amblycephala (Wuchang bream): 125273687
Entry
125273687         CDS       T08212                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03420  Nucleotide excision repair
mamb04110  Cell cycle
mamb04114  Oocyte meiosis
mamb04120  Ubiquitin mediated proteolysis
mamb04141  Protein processing in endoplasmic reticulum
mamb04310  Wnt signaling pathway
mamb04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125273687 (rbx1)
   04120 Ubiquitin mediated proteolysis
    125273687 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125273687 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    125273687 (rbx1)
   04350 TGF-beta signaling pathway
    125273687 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    125273687 (rbx1)
   04114 Oocyte meiosis
    125273687 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mamb04121]
    125273687 (rbx1)
   03400 DNA repair and recombination proteins [BR:mamb03400]
    125273687 (rbx1)
Enzymes [BR:mamb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     125273687 (rbx1)
Ubiquitin system [BR:mamb04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   125273687 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     125273687 (rbx1)
   Cul2 complex
     125273687 (rbx1)
   Cul3 complex
     125273687 (rbx1)
   Cul4 complex
     125273687 (rbx1)
   Cul7 complex
     125273687 (rbx1)
   Cul8 complex
     125273687 (rbx1)
   Cul9 complex
     125273687 (rbx1)
DNA repair and recombination proteins [BR:mamb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125273687 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125273687 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 125273687
NCBI-ProteinID: XP_048055233
LinkDB
Position
LG1:complement(50467480..50470827)
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggctgcgatggatgtggacaccccaagtggagccaacagtggagccagtaagaag
cgttttgaagtgaaaaagtggaatgcggtggctctgtgggcttgggacattgtggtggac
aactgtgccatttgtagaaatcacattatggacctctgtatagagtgtcaggccaatcag
gcttcagctacatcagaggagtgtacagtggcctggggagtctgcaatcacgcgtttcat
ttccactgcatctctcgctggctgaagaccagacaggtgtgtcccctggacaacagagag
tgggagtttcagaagtatggccattag

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