Megalobrama amblycephala (Wuchang bream): 125274052
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Entry
125274052 CDS
T08212
Symbol
ldlrb
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03272
Virion - Hepatitis viruses
mamb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125274052 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125274052 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125274052 (ldlrb)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125274052 (ldlrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
EGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
125274052
NCBI-ProteinID:
XP_048056052
LinkDB
All DBs
Position
LG8:complement(22778536..22790674)
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AA seq
791 aa
AA seq
DB search
MEIRISARLGFICSVFLLHFVHGTHAAVCSQDQFRCGNGKCITSRWVCDDADDCGDGSDE
LPESCREKTCSQSQFSCGGRLNECVSTRWHCDGKPDCENGADEQGCALKNCTDEEFRCSS
GQCVSKSFVCDKDSDCDDGSDESSCPVPTCSPSTFQCNDSVCVPQLWACDGDADCADGSD
EWPQNCPSGTGQKQQTVCRNHEVLCGSGECIHGNWRCDGDFDCNDRSDEDNCTVPTCRPD
EFLCKDGSCIAGMRQCDGSPDCRDHSDEEDCVTVKTCKEPNWFKCRSGECISADRVCDGT
KDCLDWSDEPLKECNSNECLVNNGGCSHTCNDLKIRYECLCPEGFHLINRTHCEDVNECL
DADTCSQICVNLPGSFKCDCNEGFELDHMTKDCKAITGSGAFLFFSTRHEVRKMALXSRE
YTSLIRQQKNVVALDVDINNDRIFWSDASQKKIYSAAAADPALHSTVIDSQISRPEGLAV
DWIHGNIYWTDSELQTISVATANGSKRKTLISDNLQNPRAIAIDPQHNFMFWTDWGVSAR
IEKSGLNGADRTALVTENIVWPNGITLDVLNHRLYWVDSKLHTLSSIGVNGDGRHTLMHD
QEKLPHPLALAVFEEKVFWTDVSNNGIWSANRMTGQDIAAVAEHLQSPEDIVLYHSLKQP
TGRDWCKETALVNGGCEFLCLPAPLINARSPKYTCACPDHMTLGADMRTCVSGPNATAPP
QATSRTAPGLSHTATRAALPSRDQSGDGTQTGSAGEVMQNMSRFLALPSILRSCMSPFQS
LPCVCWRLAGC
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggagattcggatcagcgctcggctcggtttcatctgctccgtttttctgcttcacttt
gtccacggaacccatgcagctgtctgcagtcaggaccagttcaggtgtggaaacgggaaa
tgcatcaccagccgctgggtttgtgacgatgcagacgactgtggagacggaagcgatgag
ctgcctgagtcctgccgagagaagacgtgttcgcaaagccagttcagctgcggcgggcgt
ctgaatgagtgcgtgtccaccagatggcactgcgatgggaagcctgactgcgagaatggc
gcagacgagcagggctgcgccctgaagaactgcacggacgaggagttccgctgcagcagc
ggtcagtgcgtgtcgaagtcgttcgtctgcgacaaggattccgactgcgacgacggcagc
gacgaatcgtcctgtcccgtccccacctgcagccccagcactttccagtgcaatgactct
gtgtgcgtgccgcagctctgggcctgcgacggggatgccgactgcgcagacggctctgac
gagtggccgcagaactgcccttccgggacgggtcagaaacagcagacggtctgcaggaat
cacgaggtcctgtgcggcagcggcgagtgcatccacggcaactggaggtgcgatggagat
ttcgactgcaacgaccggtcagatgaggacaactgcactgtgcccacctgccgtccagat
gagttcctttgtaaagacggcagctgcatcgcaggaatgcgtcagtgtgatgggagtcct
gactgccgggatcacagtgatgaggaggactgcgtaactgttaaaacgtgcaaagagcca
aactggtttaaatgtcgcagtggcgagtgcatcagcgcagaccgcgtgtgtgatggtacg
aaggactgcctcgactggtcagatgagcctctcaaagagtgcaactctaacgagtgccta
gttaacaacggtggctgttctcacacgtgcaatgatctgaagatcagatacgaatgtttg
tgtccagaaggatttcacctgattaaccgcacacattgtgaagacgtgaatgagtgtctg
gacgcagacacctgctctcagatctgtgtaaacctgccgggcagcttcaagtgcgactgt
aatgaaggatttgagctggatcacatgaccaaagactgcaaagcgattacaggatctgga
gcgttccttttcttcagcacccgtcacgaggtgaggaagatggcgctgngcagcagagag
tacacgtcactgatccgccagcagaagaatgtggtggcattagacgtggacattaacaac
gacagaatcttctggtctgatgcgagccagaaaaagatctacagcgcagcggctgctgac
cccgcccttcacagcaccgtgattgacagccagatctccaggcccgagggtctggctgtg
gactggatccacggtaacatctactggacggacagtgagctgcaaactatctccgtggcg
actgcaaatggcagcaaacgtaagacgctcatcagcgacaacttgcagaatcctcgcgcg
atcgccatcgatcctcagcacaatttcatgttctggacggactggggcgtgtcggcccgg
attgagaagagcggactgaacggtgcagatcggacggctctcgtcacggaaaatatcgtc
tggccaaacggcatcacgcttgatgttttgaatcaccgtctgtactgggtcgactcaaag
ctgcacacgctgtccagcattggcgtgaacggagacgggcggcacacgctgatgcatgac
caagagaagctgccgcatccgctggcgctggccgtgtttgaggagaaagtcttctggacc
gacgtgtccaataacggcatctggagcgcgaaccgcatgacaggccaagatatcgctgct
gtggctgaacatctgcagtctcctgaagacattgtgctgtatcacagtctgaaacaacct
acaggaagggactggtgcaaagaaacggctctggtcaacggcggttgtgagtttctgtgt
ctgccggcaccgctgattaacgcacgctcacccaaatacacgtgtgcatgtcctgatcac
atgaccctgggagcagacatgaggacatgtgtgtcaggtccgaacgccacagcgcctcca
caggcgacgagcagaactgcacccggcctgtcacacactgcaaccagagcagctctgcca
tctcgggatcagagcggagacggcacacagacgggctccgcaggggaagtgatgcagaac
atgagccggtttctagcccttcccagcatcctacggtcctgtatgtcacccttccaatcg
ttgccgtgtgtctgctggcgtttggcgggatgttga
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