Megalobrama amblycephala (Wuchang bream): 125274092
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Entry
125274092 CDS
T08212
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04514
Cell adhesion molecules
mamb04520
Adherens junction
mamb04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125274092 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125274092 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125274092 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125274092 (ptprfa)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125274092 (ptprfa)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125274092 (ptprfa)
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125274092 (ptprfa)
Cell adhesion molecules [BR:
mamb04515
]
Immunoglobulin superfamily
Type II RPTP family
125274092 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
PTP-SAK
Tc-R-P
Fn3_VIN3
V-set
DSPc
CRLF2-like_D2
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Fn3_ELFN
Insulin_TMD
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
125274092
NCBI-ProteinID:
XP_048056137
LinkDB
All DBs
Position
LG8:24537325..24761691
Genome browser
AA seq
1920 aa
AA seq
DB search
MVPHTQQASPCGSVTSLLLLLCLVVPIHADSMPSFIKTPEDQTGISGGVASFVCQAVGEP
KPRITWMKKGKKVSSQRFEVVEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINTSA
KLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDFLPVDINSS
NGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRDQREVRRV
PPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMKGEQELTKEEEMPIGRNVLELTNI
RQSANYTCVAISSLGMIDTTAQITVKALPRPPTSLIVTETTATSVTLTWDSGNPEPVSYY
VIQYRAKVSDNSFQEVDGVASTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSGSVETRTSE
QAPSSPPLRVQARMLSATTMLVQWEPPEEPNGQIRGYRVYYTSDLHFPLSTWQKHNTEDS
SLTTISGLVPDITYGLRVLAFTSVGDGPPSDILQVKTQQGVPAQPTGFEAEAELDTRIML
SWLWPVQDQITKYELTYWEADSDNNKHHITFNPAGSYAVEGLKPDTLYKFSLAARSEMGL
GVYTQPVEARTAQSTPSAPPQEVHLISLSSTSIKVSWAAPPAASRHGNIVRYSLAYQAVS
GEDLQRHEVKDIPADVSSYVLEGLEKWTEYVVWVKAHTDVGPGPESSSTRVRTREDVPGA
PPRRVEVDNVNSTALRVSWKPPLQQKQHGQIRGYQVVYSRLENGEPRGQPIILDVALPEA
QEAIITGLLAETTYSVTVAAYTTKGDGARSKAKIVTTTGAVPGKPTMIISTTIGNTALIQ
WQPPKEMVGELMGYRLRYKREEEETYTTRDFKRTDDHFTVTGLHKGATYIFKLCAKNRAG
NGEEYSKEISTPDDVPSSYPQNLRVVGLTTTTTKLAWEPPPLPERNGKIVRYVVVYRDIN
SHQNQTNGTTETQMTIQGLQPDTTYDIRVRAFTGKGGGPISPSIQSRTMSTSMPEFTKNF
GVKAVMKTSVLLTWEVPETYKSQVPFKILYNQQSVEVQGDLKRKLITRLQPDTDYSFVLM
SRGNSAGGLQQQVSIRTAPDLFTTKPTHHKQDPEEGGKLTITLPKVHNSALVRWFYIAVV
PVTTSTLRRWENPEDMDLDELLGSNGDSDVNKRRRRQTQDFLRPYIAAKLEYLPETFVLG
DEKTYNGFYNKPLPGQQQYRTFILAALKDRDSMFTVSPYSDPMMVKLHSGMSRHVEDPEM
LWVMGPVLAVVLIIIIVIAILLFKSKQERKRSSPSAKDEHSAGVKDHLLAHSSDPVEMRR
LNYQTQGSSAFSCPSTSRMREHPPVSVCALADHIERLKANDSLRFSQEYESIDPGQQFTW
ENSNLEVNKPKNRYANVIAYDHSRVVLTPVDGVPGSDYINGNYIDGYRKQNAYIATQGPL
PETLSDFWRMVWEQRTNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVSMLDTVELAT
YSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVH
CSAGVGRTGCFIVIEAMLERMKHEQSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEA
ATCGNTEVPARSLYTHIQKLTQVSPGDTVTAMELEFKKLANSKAHTSRFISASLPCNKFK
NRLVNIMPFESSRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLSETTEDFWRML
WEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDA
RDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTG
VFITLSIVLERMRYEGVVDMFQTIKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggtgccacatacccaacaggcctctccttgcggcagtgtcacatccctcctgctgctg
ctctgcctggtggtgccaatccatgcagacagcatgcccagtttcattaagactcctgaa
gatcagacagggatttcaggaggggtggcatcctttgtgtgccaggcggtcggggagccc
aaaccacgaatcacctggatgaagaagggcaagaaagtcagctcgcagcgctttgaggta
gtagagtttgatgatggctcaggctctgtgctgcggatccagccattacggacacatcga
gatgaggccatttatgagtgcacggctaccaacagcgttggagaaattaacactagcgct
aaacttactgtattagaagaggaccagatccctcatggcttcccaaccatagacatgggt
ccacagctgaaggtggtggagcgaacgcgcactgccaccatgctttgtgccgccagtggg
aaccccgacccagagatctcctggttcaaagacttcctgcctgtcgacattaacagcagc
aatggacgaatcaaacaactccgttcaggtggtacaccaatcagaggggcgctgcagatc
gagaacagcgaggagtcggaccagggcaagtatgagtgtgtggcagtgaacagcgcagga
acacgctactccgctcctgccaacctctacgtcagagaccagcgggaagtacggcgagtt
ccgccacgtttctcaatcccgcccaccaatcacgaagtgatgccgggcggcagtgttaac
ctcacctgcgtggcggtgggcgctcccatgccctacgtgaagtggatgaagggtgaacag
gaactaaccaaagaggaggagatgcccattggccgaaatgtgctggagctcaccaacatc
cgccagtcggctaactacacctgtgtggctatatcctccctgggcatgatcgacaccaca
gctcagatcacggtcaaagctctgccccggcccccaacctctctgatcgtcacggaaact
accgccaccagcgtaactctaacatgggattccggcaaccccgaacccgtatcgtactat
gtgattcagtaccgggccaaagtctcggacaacagtttccaggaagtggatggagttgcg
tccacgcgctacagcatcggtgggttgagtccttactctgagtatgaattccgtgtcatg
gcggtcaataacatcggccgcgggccgcccagcgggtcggtagagacacggaccagtgaa
caggccccctcgtctcctcccctgcgtgttcaggcccggatgctgagcgccacgaccatg
ctggtgcagtgggaacctcccgaagagcccaacggacagatacgaggatatcgagtgtac
tatacgtccgacttgcatttcccactcagcacatggcagaaacacaacacagaggacagc
agcctgaccactatctcaggcctggtacctgacatcacgtacggcctccgcgtgctggcg
ttcacctccgtgggagacggcccaccctcggacatactgcaggttaaaacacagcaagga
gtgccggcccagcccactggttttgaagcagaggcagagctcgacactcgaatcatgctg
tcatggctgtggcccgtccaggatcagatcaccaaatatgagctcacatactgggaggct
gactctgacaacaacaagcaccacatcaccttcaacccagctggttcatatgctgttgaa
ggcctgaagccagacacactctacaagttctcactggccgcacgctctgaaatggggctc
ggggtgtacacacagcctgttgaggcccggacggcccagtccaccccgtccgccccccca
caggaagtgcacctgatcagtctcagctcaaccagcatcaaggtgagttgggcggctccc
ccagccgccagtcgtcacggcaacatcgtcagatactctctggcctatcaggcggtgtcg
ggtgaggacctgcagcgtcacgaggtcaaggacatccctgcggatgtgtccagctatgtg
ctggaggggctggagaaatggacggagtacgtggtgtgggtgaaagcgcacaccgacgtg
gggcccggcccggagagcagcagcactcgcgtcagaaccagagaggatgtgcctggcgcc
cctccacgcagggttgaggtggacaacgtgaactccacagccctgcgggtgtcgtggaaa
cctcctctgcagcagaagcagcacggacagatccgtgggtatcaggtggtttactcccgg
ctggaaaacggagagccacgtgggcagcccatcatactggacgtcgccctacctgaggcg
caggaggccatcatcaccggcctgctggctgaaacgacatattctgttactgtggcggcg
tacaccactaaaggagacggagcacggagcaaagccaaaatagtgaccacaactggggca
gttccaggcaagcccaccatgatcattagcaccaccatcgggaacacagctctgatccag
tggcagccccctaaagagatggtgggtgaactgatgggctacagactccgctacaagcgt
gaagaggaggagacctacaccacccgtgacttcaaacgcaccgacgaccacttcaccgtc
actggcctgcacaagggcgccacctacattttcaagctctgcgccaagaaccgcgcaggc
aatggggaggagtacagcaaagagatcagcaccccggacgacgtccccagcagctaccca
caaaacctcagagtggtgggcctgacgaccaccactaccaaactggcctgggaaccccca
cctctgcccgagaggaacgggaaaatcgtacgctacgtggtggtgtaccgtgacatcaac
agccatcagaaccagaccaacggtaccacagagacgcaaatgaccatccagggtctgcag
ccggacaccacctatgacatcagagtgagagcgttcacggggaaaggagggggtccgata
agccccagcattcagagcagaaccatgtctacctccatgcctgagttcactaaaaacttt
ggtgtgaaagctgtgatgaagacctctgtcctgctcacatgggaggtgccagaaacctac
aagtcccaagtgcctttcaagatcctgtataaccagcagagcgttgaggtgcagggtgac
ctgaagaggaagttgatcacacggctgcagccggacactgattactcctttgtgctgatg
agccgagggaacagcgctggcggacttcagcagcaggtctccatccgcaccgccccagac
ctgttcaccaccaaaccaacccaccataaacaagacccagaggagggcggcaaactcacc
atcacactgcccaaagtgcacaacagcgccctcgtcaggtggttttatatagcggtggta
ccagtaactacatcaactctacgccgctgggaaaacccagaggatatggatctggatgag
cttttggggagtaatggagactcagatgtgaataagaggagaaggagacaaactcaggac
tttctgcggccttacatcgctgccaagttggagtatcttccagaaacctttgtgttagga
gacgagaaaacttacaatggcttctataacaaacctctacctggacagcagcagtaccgc
acgtttatactggcagcactgaaagaccgggactcaatgttcacagtgagtccttactct
gatcccatgatggtgaagctccacagcgggatgtcccgtcacgttgaggacccagaaatg
ctgtgggttatgggaccagtgctggccgtcgtcctcatcatcatcatcgtcattgccatc
ctgctcttcaagagcaaacaggagaggaagcgctcctctccctcggctaaagatgagcac
tcagctggagttaaagatcacttactggcccattcctctgacccggtggaaatgaggagg
ctcaactaccagacacaaggttccagtgccttcagctgccccagcacttcaagaatgcgg
gaacaccctccagtttctgtctgtgctttggctgaccacattgagcggctgaaagccaac
gacagcctacgcttctcacaggaatatgagtctattgaccctggccagcagttcacctgg
gagaactccaacctagaggtcaacaagcccaagaaccgctatgcaaacgtcatcgcttat
gatcactctagagtcgtgctgactcccgttgatggtgtaccaggaagtgactacatcaat
ggcaactatattgacggctaccgcaagcagaacgcctacatcgccactcaaggtcctttg
cctgagacgctcagtgacttctggagaatggtgtgggagcagaggaccaacactatagtc
atgatgaccagactggaggagaagagcagggtgaagtgcgatcagtactggccgagccgt
ggaacagaaacatacggcatgattcaagtgtccatgttggatacagtggaattggccacc
tacagcgtcagaaccttcgctctctataagaatggatccagtgagaaacgggaagttcgg
cagttccagttcatggcctggccggatcacggtgttcccgaataccctacaccaatttta
gcctttctacgcagggtcaaggcctgcaacccacctgacgctggacccatggtggttcac
tgcagcgctggcgtgggtcggacaggctgttttatcgtaatagaggccatgcttgagcgg
atgaagcacgagcagtcggtggatatctacggtcacgtgacctgcatgcgcgctcagagg
aactacatggtgcagacggaagatcagtatatcttcatccacgaggccctgctggaggcc
gccacctgtgggaacacggaggtccctgcgcggagcctgtacacacacatccagaaactc
actcaggtgtcacccggagacaccgtcaccgccatggaactggagtttaagaaactggcc
aactctaaagcacacacctccagattcatcagcgctagtctgccatgcaacaaattcaag
aaccgactggtcaacatcatgcccttcgagtccagccgtgtgtgtctgcagccaatcaga
ggggtggaggggtccgactacattaacgccagcttcatcgatggatacaggcagcagaag
gcgtatatcgccacacaaggtccattgtctgaaaccacagaggacttctggaggatgcta
tgggagcataactccaccatcgtggtgatgctgacgaagctcagagagatgggacgggag
aagtgtcatcagtactggcctgcagagagatctgcgcgctaccagtacttcgtcgtggat
cccatggctgaatacaacatgccgcagtacatcttacgggagtttaaagtcacagatgcc
agggatggccagtctaggacaatccgccagtttcagttcaccgattggccagaacaaggc
gtgccaaagacaggagagggctttattgatttcattggccaagtccacaaaaccaaggag
cagtttggacaggatggaccaattactgttcactgcagtgctggtgtcggcagaacagga
gtcttcatcactttaagtattgttttggagcggatgaggtatgaaggggtggtggacatg
ttccagaccataaaaacgctccgcacgcagagacctgccatggtacagacagaggaccag
taccagctgtgctacagagcagctctggagtacctgggcagcttcgatcactatgcaacg
taa
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