Megalobrama amblycephala (Wuchang bream): 125275542
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Entry
125275542 CDS
T08212
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00310
Lysine degradation
mamb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125275542 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125275542 (setdb1a)
Enzymes [BR:
mamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
125275542 (setdb1a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125275542 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125275542 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Tudor_5
Pre-SET
Tudor_4
MBD
DUF5604
Sigma54_AID
Agenet
Motif
Other DBs
NCBI-GeneID:
125275542
NCBI-ProteinID:
XP_048058536
LinkDB
All DBs
Position
LG9:29329923..29347957
Genome browser
AA seq
1565 aa
AA seq
DB search
MSSGKDDNLLRMTKDDLQRWIQAEVERNPHLVERREQLAQVEEWVKQREKESTYTRLLYS
NACESVFECESVMKGLYGMLGLDYRDEDSEEEGGGGGPQDVIHITDDNEENRQENSVCNG
DDDDDDIVVIDLGATKETLEPMLEKVTMAIQKSSRLVQDLVQMVNKSSSISTGSPSSDIS
NRPSSTSTPETSRSESVTPKLEMMNNSIAIVKTESLLKVPEMSSFLSSSEQCKSFASHNS
DFRPAIKTEPQLTALTPWEMSISKQYDTTASHNRTSIRLIKTEPQTTELMPWEKNISKHE
TAAHQIKTEPQLTAVTSSEMSLIPSKQLETIDRANSGSIATVKSEPHLSAIKPEMSSPPS
NSKLFEMVSSHKLASIAEIKTEPQMKAVTPEIDLLESDSEPSDRLNSEFKLKLSKTSKIH
SEQLKTSEGHNSETDNNETDPHVTSETPSEMSSTIASADTACLETKQAEPESTTTTSEVS
LSQSVSEEPENIASDDTLTETNQPEPEVTTVTSPDVSPLPSDSEEPENTASCDSEFIDKT
EKPTTRSKSAKPSVSTTSPTARLRSSKNSTSVTSTSSPEKETKKAASPEESIDEPSDTED
QPASPIPSDEPPESPSKPPPNQTPTTDETTHNDDSAEPSKDKKRSKSSSKSSKSSQAHKE
MILKVSTGVLGKRKPNVWCRGTVEEVQTTEKGHKYKVEFKKGKQILLPAHHVAPAKPPVL
KDLFVGCRVVASYKDDKGKILYNAAVLVELPERKNRMRFMVFYDDGKAAYLALPDIHVVC
KQVRKVWRDIEDEACRSQVKEYLRVYPNPIAVVLRIGQDTRAVRNDKFESCTVLQLDGSL
IQICFKKDNQKEWIYKGSDKLEHIVNIKKRLSKEKPQQTALHKTQQSPQQKSQEAPQQKS
QEAPQQKTQQPAKTAGNAMPQHNTTSSSTKVASATVTSTTVTSADETPARVTRQSTVTKT
PSISPQNIMSAAFQPKVILQKLSKLSLVLPADGVSKGKSATAVSTSSLRSAKRPAPDEEE
EYVSEEEEHVSEQEQSKSIYLYHRCCPACLDGVRPSQADMHRGQNPLLIPLLFKFRRMTA
RRRIDGKVFFHIFYRSPCGRSLCDMQEVQEYLIETRCDFLFLEMFCMDPFVLVNRARPPS
TSTGQPHLYLPDISEGREVVPVPCVNEVDNTLAPNVTYTKDRSPAPGVNINTSLDFLIGC
DCTDGCRDRSKCACHQLTIEATSLCSGGPVDVSAGYTHKRLPTSLPTGVYECNSLCRCDP
RMCSNRLVQHGMQLRLELFMTQHKGWGIRCRDDVAKGTFVCVFTGKIVNEDKMNEDDTVS
GNEYLANLDFIEGVEKLKEGYESEAYCSDTEVESNKKTITMKTGPLWKNPLYQEDSSSGE
EREEPMELATEQEDMEVCDESLGETKLSHKPHEAPKDAQKKVTKQIREDGQEPSGPKRCF
AIKSSQRRVKPLETIDAQNEKKRTALHSNNTRRLFNDEDTCYIIDARQEGNLGRYINHSC
SPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSLRC
TGRLL
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcggaaaagatgataacctcctgaggatgacaaaggatgacctgcagcgctgg
atccaggcagaggtggagcgaaaccctcatctggtggagagacgtgagcagctggcacag
gtggaggagtgggtgaagcagagggagaaagaatcaacctacacccgccttctgtacagc
aatgcctgcgaatcagtctttgagtgcgagtcggtgatgaagggtctttatggaatgctg
ggattggactaccgagacgaggactcggaagaggaaggaggaggaggaggaccacaggac
gtcattcatatcacagatgataatgaggagaatagacaggaaaatagtgtctgtaatgga
gatgatgatgatgatgatattgttgtcattgatctgggagccaccaaagaaaccttggaa
ccaatgcttgaaaaggtgactatggccattcagaagtcatccagacttgttcaggactta
gtccagatggtgaacaaaagttcctccataagcactggatcaccatcatccgacatcagc
aacagaccttcatcgacctcgacccctgagaccagccgttctgaatctgtcacgccaaaa
ttggaaatgatgaacaactcgattgcaatagttaagaccgaatctttgttgaaagtacct
gaaatgtcctcatttctcagcagttcggaacaatgcaaatcttttgccagtcataattca
gattttagaccagcgattaagactgaacctcaactgacagcattaaccccttgggaaatg
agcatttcaaaacaatacgacaccactgctagtcataaccgtacatccatacgattaatt
aagacggagcctcaaacgacagaattaatgccttgggaaaagaacatttcaaaacatgaa
actgctgctcatcaaattaaaactgaacctcagttgacagcagtgacttcttcagaaatg
tctttgattccaagcaaacaactagaaactattgacagggctaattctggatccattgca
acagtaaaatctgagcctcacttgtcagcaataaagccagaaatgtcttcgcctccaagt
aattcaaaactttttgaaatggtttccagtcataagttagcatccattgcagaaattaag
actgaacctcagatgaaagcagtgactcctgagattgatttgcttgaaagcgattctgaa
ccgtcagacaggctgaattcagaattcaaacttaaattatcgaagacttctaaaatccat
tcagaacaattgaaaactagtgagggtcataattcagagactgataataatgagactgat
cctcatgtgacatcagagaccccttcagaaatgtcttcaactattgccagtgccgataca
gcgtgcttagaaacaaaacaggctgagcccgagtcaaccacaacgacttctgaagtatct
ttgtcacagagcgtttctgaagaacctgaaaatattgccagtgacgatacattaactgaa
acaaaccagcctgagcctgaggtaaccacagtgacttctcctgatgtgtcacccttgcca
agcgattctgaagaacctgaaaatactgccagttgtgattcggaatttattgacaagaca
gaaaagccaacaacaaggagcaaatctgctaaaccttctgtgtccacaacaagtccaaca
gccaggctgagatcttcaaaaaactctacgtctgtcaccagcacttccagccccgaaaaa
gaaacaaaaaaggcggcatcacctgaagagagtattgatgaaccctctgacacagaggac
cagcctgctagtcctatacccagtgatgaaccccctgaatcaccttctaaaccacctcca
aaccagactccaactaccgatgagaccacccacaatgatgattctgctgaaccttctaaa
gataaaaaaagatccaagtcttcatccaagtcttctaagtcttctcaagcacataaagag
atgatactcaaggtcagcacgggagttttggggaaaaggaaacccaacgtgtggtgtcga
ggaacagtagaagaagtccaaacgactgagaagggccacaaatataaggtggaatttaag
aagggtaaacagattctgctacctgctcatcacgtggcccctgcaaagcctcctgtgctt
aaggatttgtttgttggttgtcgtgttgtggccagctacaaagatgataaaggaaagatc
ttgtataatgctgccgtgctggttgagcttcctgagcgcaagaatcgcatgaggttcatg
gtgttttatgatgatggcaaggcagcgtatctggcactgccagacattcatgttgtctgc
aaacaagtgagaaaggtgtggagggacatcgaggatgaggcatgtcggtcgcaggtgaag
gaatatctccgtgtctatcccaaccccattgctgtggtacttcgcatagggcaagacacc
agggcagtgcgaaatgacaagtttgagtcctgcacggtgcttcagttggatggcagcctg
atccagatctgctttaagaaagacaatcaaaaagagtggatttataaaggctcagacaag
ttggaacacattgtaaatattaagaaacgtctttctaaagagaaaccacaacaaactgct
ctacacaagactcagcaatcgcctcaacagaaatcgcaagaagcgcctcaacagaaatcg
caagaagcgcctcaacagaaaactcaacagcctgctaaaacagcaggaaatgccatgcct
cagcacaacacaacttcctcctctacaaaagttgcctcagcaactgttacttcaacgact
gtcacctcagcagatgagactcccgcacgcgtgacccgacaatccacagtcaccaaaaca
ccatctatctcccctcaaaatatcatgtcggcagctttccagccgaaggtcatcctccag
aagttgtctaagctctcgctcgtcttaccagctgacggtgtgtcgaagggtaaatctgct
acagcagtcagtacctcaagtttaagaagtgcaaaacgacccgcccctgatgaggaggaa
gagtatgtttctgaggaagaggagcatgtttcagagcaagagcagtccaagtctatatac
ttgtatcatcgctgttgtccagcatgtctggatggggtaagaccgtctcaggcagacatg
catcgtggtcaaaatcctcttcttatcccattgctttttaagtttcggcgaatgactgct
cggaggcgcatcgatggaaaggtgtttttccacattttttatcgttctccatgtgggcgg
agcctgtgtgacatgcaggaagttcaagaatacttgattgaaacacgatgtgacttcctc
tttctggaaatgttttgtatggatccatttgtccttgtgaatcgtgcccgacccccttcc
acatcaactggccagcctcacctctacctgccggacatctcggagggtagggaggtggtg
ccggtgccctgtgttaatgaagtggacaatacacttgctcctaatgtcacttacaccaaa
gacagaagtccagccccaggtgttaacatcaatacaagcttagatttcttgatcggctgt
gactgcacagatggctgtcgggacaggtcaaagtgcgcatgccaccagctgaccattgag
gccacgtccttatgcagtggcggtccagtagatgttagtgctggatacacacacaagagg
ttgccaacaagcttgccaacaggggtatacgagtgtaactctctctgccgctgtgaccca
agaatgtgcagcaacaggctggttcagcacggtatgcagctgcggctggagctcttcatg
acacagcacaagggatggggcatccgctgcagagatgatgtggccaagggcacattcgtg
tgtgttttcactggtaaaatagtaaacgaagacaaaatgaatgaagatgacacggtgtcc
ggcaatgagtatttggccaaccttgacttcattgagggggtggagaaactaaaagagggt
tatgagagcgaggcgtactgctcagacacagaggtcgaaagcaacaagaagaccataacc
atgaaaacagggccgttgtggaaaaatcccctctaccaagaagattctagcagcggtgaa
gaaagagaagaacctatggagctggccacagaacaagaggatatggaagtctgtgatgag
tccttaggcgagacaaaactatcccataagccacatgaagcacctaaagatgctcagaag
aaagtgaccaaacaaataagagaggacggtcaagaaccctcaggtccaaagcgttgcttt
gccataaagtcctcccagagaagagtaaaacccctagaaaccattgacgcacaaaatgag
aaaaagaggacagctctgcattccaacaacacccgcagactgtttaatgacgaggacacc
tgttacatcattgacgcaagacaagagggcaaccttggccgctacatcaaccatagctgc
agtcctaatttgtttgtccagaacgtctttgtggacacacatgacctccggttcccatgg
gtggcgttctttgccagcaagcgcatcagggcaggtacggagctgacgtgggactataac
tatgaggtgggcagtgtggaggggaaggttctgctctgctgctgtggctcattgcgctgt
acaggaagactgctctga
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integrated database retrieval system
