Megalobrama amblycephala (Wuchang bream): 125276543
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Entry
125276543 CDS
T08212
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125276543 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125276543 (c9orf72)
Membrane trafficking [BR:
mamb04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
125276543 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
125276543
NCBI-ProteinID:
XP_048060066
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All DBs
Position
LG10:complement(5429720..5441180)
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AA seq
462 aa
AA seq
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MSAACPPQSPAVAKTEVLVEDWCPVLAATFAYWDNILGPRVRHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRNAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISMLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRSELSALWKAASEDDISSDNLINAQDSFTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDDTQKGKKPFRSLRNLKTDLDL
TMEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcctgtcccccgcagtctccagctgtagctaagactgaagtgctggttgag
gactggtgtcccgtgctggctgcaaccttcgcttactgggacaacatcctgggacctcgt
gtacgccacatctgggcgcccaaaggtcaagggttgtcgctgctcagtgatggagaggtc
acgtttctggccaatcatacgctgaacggcgagattttgcgaaatgcggagagcggcgca
gtggatgtgaaattcttcgtcttggcggaaaagggagtcatcatcgtctcactgattttt
gatggagaactcaagggtgataagaacacttgcgctctgtcaatcatcctgccacagtca
gagctcagtttctacctgccactgcacagcgtgtgtgtggagagactcaaacacattatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctctatgttgtcatctgag
attgttcccataatggagcttctcacttccatgaagaaacacagtgtaccagaggaggtg
gatctaaaggacactgtgctcaacgatgatgatattggagacagctgtcatgaagacttt
ttgcacaaggctatcagctctcatcttcagacgtgtggctgctccatggtggttggcagc
aatcctgagaaagtcaataagatcgtgctcacgctgtgtctcttcctcactcctgcggag
agaaagtgctctcgactctgtcaccccgatggctcgtttaaatatgacaccggtctcttt
gttcagggcctccttaaggactccactggcagctttgtgttaccctaccggcaggtgctc
tactccccgtaccccaccacccacatcgacgtggacattaacacagtgaagcagatgcca
ccctgccacgagcacacgtatcatcagcggcgctacatgcgctcggagctcagtgccctt
tggaaggccgccagcgaggatgacatcagttcagacaacctcatcaatgcccaggactcc
ttcaccccagacttgaatatatttcaggatgtgatgcacaaagacacacttgtgaagtcc
ttcatagatgaggtgtttctgttgaagccaggtctttctctgcggagtgtgtatttatcc
cacttccttctcctgctgcacaggaaggccctgacactgctccgatatattgaggatgat
acgcagaaggggaagaaacctttcagatctctacgcaatctgaaaactgatttagactta
acaatggagggggatttgaatatcatcatggcgatggcagagaagctgcgggcaggcctt
cactccttcgtttttgggaagtctttccttaccagcgtgcaggagcgtgacctgctcatg
agcttctga
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