Megalobrama amblycephala (Wuchang bream): 125278074
Help
Entry
125278074 CDS
T08212
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125278074 (otofa)
Membrane trafficking [BR:
mamb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125278074 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
125278074
NCBI-ProteinID:
XP_048062805
LinkDB
All DBs
Position
LG11:23870257..23963732
Genome browser
AA seq
2046 aa
AA seq
DB search
MALVVYLKTVTELRGKGDRIAKVTFRGLSFFSRVLENCEDEARFEQAFRWPIGSQVDGDE
MLEIQVFNYSKVFTNRLIGTFRMVLQKVVEEGHLEVSDTLIDDNNTAIRTNISIEIKYQT
MDGSVKVWSDGEFLDIPDDCDGTFQFETDSLLSGRSQSSGTSPGRSIHGIPTFRKTGKGV
FSAMKLGKTRSSKDDHKKGDDPAILDAEDLDRKAMRLGGGLDPDTISLASVTAVTTNVSN
KRSKPDIKMEASSGRPVDYQISVTVIEARQLVGLNMDPVVCVEIGEDKKYTSMKESTNCP
YYNEYFVFDFHVPPDVMFDKILKISVIHSKNLLRSGTLVGTFKLDVGTVYSQPEHQFHHK
WAMLSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANEPDEDDIEGNLLLPEGVPSERQ
WARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVLVQFAGQKGKTSVQKSSYE
PIWNEQVVFTEMFPPLCRRLKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTMGPA
WVNMYGSTRNYTLMDEHQDLNEGLGEGVSFRARLLISVAVEILDTSSTEIISSTEVQMEP
VSNISESATGKMEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVNKPASAKK
KKEGGGESEEEESELIHNSSDEEAEDDGDLMSVPSTPPMKPVITDRNYFHLPYFEKKPCI
YIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEIIKTEKAYPERRLRGVLEELSTSCS
RFVTLANKDQNLSGRTKLDRERLKSCMREMESMAQQAKIIRSQVKRNTVRDKLKLVLNFL
HRLRFLADEPQHSIPDVFIWMISNNKRIAYSRIPSKDILFSIVDEEMGKDCGKVKAVFLR
LPGKKGFGPAGWTVQAKLEMYLWLGLNKQRKDFLSGLPSGFEENKAVKGIGIQAVPPISL
VYNMKQVFQLRAHMYQARSLFAADNSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQLLV
FDNVELYGEAGELRDDPPIIVIELYDQDTVGKAEFIGRTFAKPLTKMVDEHYGPPRFPPQ
LEYYQIYRGNCTAGDLLAAFELLQIPYDDEEIRRALIAVHDFAVPQIKIGPAGRAALPPI
DGPTDSDRGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGKGVQ
SALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVTSLRK
FIYSTPDKTTNNWAHTARLANGYMALTNGTSHSRPHSRPISHPSGDIVVNMDPEPNIKKM
DTVVKIDATTDAVVKVDLNEDEKEKEKKKKKKKKGEDLEEEEQDESMLDWWSKYFASIET
MMENLRVQEAALAEAEEREDLEIAAESAEIKADEFPMKGTKPKEKSKDKKSSKDKKKNHD
GTEKRPPKPKVDELMVYNKELECEYGNFEDWLHTFNLYRGKAGDDDDHNVVDDDRIVGRF
KGSLCMYKLPLSEEITREAGFDPNMGMFQSIPHNDPINVLIRIYIIRATDLHPADINGKA
DPYIVIRLGKSEIRDKENYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLI
GETKIDLENRYYSKHRATCGIASNYSVHGYNVWRDPQKPTQILAKLCKEGKLDGPHYGPG
GKVKVANRIFLGSTEMEDESGLRKQTEEHLALTVLRHWEEIPRVGCKLIPEHVETRPLLN
PDKPGIEQGRIEMWVDMFPMDVPAPGPAIDISPRKPKRYELRVIIWNTDEVILEDDDYFT
GEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLMAEEKIVISKKES
MFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNKFPRGAKTAKQCSLNMVLKEH
ELPTISIFKQKRVKGWWPFVARDENDEFELTGKVEAELHLMTAEEAEKSPVGLGRNEPEP
LEKPNRPTTSLSWLLSPIRVTCIMGWRQYKLATVVTLLSITGLIFLGLLFFSLPSAFTQK
IFNISG
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtggtctatctaaagactgtcacggagcttcgtgggaagggggaccgaatc
gcaaaagtgactttcagaggtctctccttcttctctcgggtgctggaaaactgcgaggat
gaggctcgatttgagcaggcattccgatggccaattgggagtcaagtggatggggatgag
atgctggagatccaagtgtttaactacagcaaagtcttcactaacaggttaattggcact
ttccgcatggttctgcagaaggtggtggaggaaggtcacttggaggtgtctgacactctt
attgacgacaataacacagccatacggacaaatatttccatagagatcaaatatcagacc
atggacgggagtgtaaaggtgtggagcgatggtgaattccttgatattccagatgactgt
gatggaaccttccagtttgagacagacagtctactctctggacgtagccagagctccggg
acatcacctggacgatctatccacggcattcccacattccgcaagacaggaaaaggagtg
ttttcagccatgaagctgggcaagacacgtagctccaaagatgaccacaaaaaaggagat
gaccctgccattttggatgcagaagatctggatcgaaaggccatgcgtctgggcggtggg
cttgaccctgataccatatcactggcctctgttactgcagtaaccactaatgtctccaac
aaaagatcaaagcctgacattaagatggaggccagttcagggcgtcctgtggattatcag
atcagtgttacagtaatcgaggcccgtcagttggttggtttgaacatggaccctgtggtt
tgtgtggaaattggagaggacaagaagtatacatcaatgaaggagtccacaaactgcccc
tactacaatgagtactttgtctttgacttccacgtgcctccagatgtcatgtttgacaag
atcctgaagatatcagtaatacattcgaaaaaccttctacgaagtggtaccctggttggc
accttcaaactagatgtgggaactgtttactcacaacctgagcatcagttccatcacaaa
tgggcaatgctgtcggaccctgatgacatcacagctggctgcaaaggttacgttaagtgt
gacattgcggttgtaggaaaaggagacaacatcaagactccccacaaggccaatgaacca
gatgaggatgacatagaggggaatcttctcttgccggaaggtgttccatcagagagacag
tgggctcggttttatgttaagatttatagggctgagggactacctaagatgaacaccagc
atcatggccaacgtgaagaaagcttttattggggagaatagggaccttgtggacccttat
gtcctggtgcaatttgcagggcagaagggtaaaacgtcagttcagaaaagcagctacgag
cccatctggaatgagcaagtagtcttcactgagatgttcccacctttgtgtaggcgattg
aaagttcagatccgtgattcagacaaggtgaatgatgttgccataggaacccatttcatc
gatctacgcaagatagcaaatgatggagacaaagggttcttgcccactatgggcccagct
tgggtgaatatgtatggttctacccgtaactacaccctgatggatgagcatcaggacctg
aatgaggggctgggggagggcgtgtccttcagggcacgcctactcattagtgttgcagtg
gagatcctggacacctcttccacagaaataataagctctactgaggtacaaatggagcca
gtgtccaacatctcagagagtgccacagggaagatggaggagtttttcctttttgggtcg
ttcttggaggccacaatgatagacaggaaaattggagataaacccatcagctttgaagtc
actatcggtaactatggtaaccagattgacggagtgaacaagcctgcatcagcaaagaaa
aaaaaagagggtggaggagaaagtgaggaagaggagtctgagctcatccacaactccagc
gatgaagaggcagaggatgatggagatttaatgtctgtgccgtccacccctccgatgaaa
ccggttatcactgacagaaattacttccacttgccttactttgaaaagaaaccctgtatt
tacatcaagagctggtggcaggaccagaggagacggctctacaactccaatataatggac
aagattgcagataaactggaggaaggtctgaatgatgttcaagaaatcataaaaacggag
aaggcgtatccagaacgcagacttaggggtgtattagaagaactgagcacaagttgcagc
cgattcgttacgctggcaaacaaagatcagaatctatctggaagaaccaagctggacagg
gagaggctgaagtcctgtatgagagagatggagagtatggctcagcaggctaagattatt
cgatcacaagtgaagagaaacacagttcgagacaaactcaagctagtgttgaatttcctt
cataggcttcgtttcctggcagatgagccccagcacagcatccccgacgtgttcatatgg
atgattagcaacaacaaacgcatagcgtactcccgtataccctccaaagacatcctcttc
tcgatcgttgatgaagagatgggcaaagactgcgggaaagttaaagctgtttttctcagg
ctgcctggaaagaaaggctttgggcctgctggctggacagttcaggctaaactagagatg
tatttgtggctggggttgaacaaacagaggaaagacttcctgagcggcctccctagcggc
tttgaagaaaacaaagcagtgaagggaataggcatacaagctgtccctcccatcagccta
gtttataacatgaagcaggtgtttcagctgagggcacacatgtatcaggctcgcagtctg
tttgctgctgacaatagcggcctgtctgacccatttgcaagggtcttcttctccacccac
agtcaggtgacagaggtcctcagtgagactctctgtcctacatgggatcagttgctcgta
tttgataatgttgaactttacggtgaggccggtgaactccgtgacgaccctccgatcata
gtcattgaactgtacgaccaagacactgtggggaaagccgagttcattgggcgaactttt
gcaaagccactaactaagatggttgatgaacactacgggcccccgcggtttcccccccag
ctggagtactatcagatctacagagggaactgcactgcaggagatctgttagctgctttt
gaactactgcagattccttatgatgatgaggagatcagaagagctcttattgctgtccat
gactttgctgtgcctcagatcaagattggtccagcagggcgggcagcacttcctccaatt
gatggtccaactgattctgaccgcgggcccattctgcctgttccattgggcatacgacca
gttctcagcagatatcgcatagaggtcctgttttggggtctgagggaccttaaaagaatc
aacctggcacaggtggacaggcctcgtgtggacattgagtgtgcagggaaaggagttcag
tcagccctcattcagaactacaagaagaatccaaacttcagcacattagtcaagtggttt
gaagtggatctgccagaaaatgagctactccatccaccactcaatattcgggtggtggac
tgtagggcattcggacgatacaccttggtggggtctcatgctgtgaccagccttcgcaag
ttcatctacagcaccccagacaagactactaataactgggctcacacagctagactggcc
aatggctacatggctctcaccaatgggacatctcattcccgtccccactcccgtcccatt
tctcatccctcaggtgatattgtggtcaatatggaccctgaacccaacattaagaagatg
gacacagttgtcaagattgatgctaccaccgatgctgttgttaaagttgacttgaacgaa
gatgaaaaggagaaagagaaaaagaagaagaagaaaaagaagggagaagacctggaggaa
gaggagcaagatgagagcatgttggactggtggtccaaatattttgcttcaatagagact
atgatggagaatctcagagtccaggaggccgctttggcagaggcagaggaaagagaagat
ttggagatagcagcagagagtgcagagatcaaagctgatgaatttcctatgaaagggacc
aaacccaaggagaagagcaaagacaagaagagctccaaggacaaaaagaagaaccatgat
ggcacagaaaaacgacctccaaaaccaaaagttgacgaacttatggtgtacaataaagag
ctggagtgtgagtatggtaactttgaggactggctccacaccttcaacctgtatagagga
aaggctggagatgatgatgaccacaatgtggttgatgatgacagaattgtgggcagattc
aagggctccctctgtatgtataaactacccctgtctgaggagatcaccagggaggcagga
tttgacccgaacatgggaatgttccaaagcattcctcacaatgaccctatcaatgttctc
atcaggatttatatcattagagccacagacctgcatcctgcagatataaatggtaaagcc
gacccttatatagtcatccgattgggaaagtcagagattcgggacaaggagaactatata
tccaagcagctgaatcctgtctttggaaagtcatttgacatagaggccacattcccaatg
gagtccatgctgactgtggcagtatatgactgggatttagtcggaactgatgacctgatt
ggtgagactaagattgatttggagaatagatactacagcaaacacagagccacgtgtggt
atcgcttccaactactctgtccatggttacaatgtatggcgggaccctcagaaaccaaca
cagatccttgctaagttgtgcaaagaaggtaaattggatggaccccactatggacctggt
gggaaggtcaaagttgcaaaccgcatctttctggggtcaacagaaatggaggatgagagt
ggtctgagaaagcagacagaagaacacttggctcttacagttcttaggcattgggaggag
atcccacgtgttggttgcaaactcatccctgagcatgtggagaccaggccgctcctcaac
cccgacaagccaggcatagagcagggaagaattgaaatgtgggtggacatgtttcctatg
gatgtaccagcaccaggaccagccattgacatatcaccacgcaaaccaaagagatatgag
ctcagggtgataatatggaatactgacgaggtaattctggaagatgatgattacttcaca
ggggaaaagtccagtgacatatttgtgaggggctggctaaaaggacagcaggaggataaa
caggatacagacgtgcattatcactctctaactggagagggaaacttcaactggcgcttt
gttttcccctttgactatctcatggctgaggagaagatagtcatctccaagaaggaatcc
atgttttcctgggatgagacagagtacaagattcctgcacgactcactcttcaagtatgg
gatgctgaccacttctctgctgatgatttcctaggtgcgattgagttagacttaaataag
tttccccgtggggcaaaaacagccaagcagtgctctctcaacatggttctcaaagaacat
gagctgcctaccatttccatcttcaaacagaagagagtgaagggctggtggccatttgtg
gctcgagatgagaatgatgaatttgagctcacgggaaaagtggaggcagagctccatcta
atgacagcggaggaggcagagaaaagtccagtcggccttggacggaacgaacctgagcca
cttgagaaaccaaatcgtccaactactagcctgtcgtggctgttgagtccaatacgggtg
acctgcataatgggttggcggcagtataagttggccacagtggtgactctgctcagcata
accgggctgatctttttgggcctcctgttcttttctctgccttcagctttcacccagaag
atcttcaacatctcaggataa
DBGET
integrated database retrieval system
