Mycteria americana (wood stork): 142407920
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Entry
142407920 CDS
T11228
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
mame Mycteria americana (wood stork)
Pathway
mame04115
p53 signaling pathway
mame04210
Apoptosis
mame05164
Influenza A
mame05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
142407920 (APAF1)
04115 p53 signaling pathway
142407920 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
142407920 (APAF1)
05168 Herpes simplex virus 1 infection
142407920 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
APAF1_C
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WHD_APAF1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
NB-ARC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
CARD
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
CFAP251_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
CARD_2
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
eIF2A
ASA1
Ge1_WD40
Tricorn_2nd
Beta-prop_ACSF4
PEP5_VPS11_N
Beta-prop_RSE1_2nd
AAA_16
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
nSTAND6
AAA_22
WHD_Dark
LRRC37
DUF2415
Motif
Other DBs
NCBI-GeneID:
142407920
NCBI-ProteinID:
XP_075353755
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Position
1:53239933..53278915
Genome browser
AA seq
1298 aa
AA seq
DB search
MDVKSRNCLLTNRQALEKDIKTSYIMDHMISDEVLTLQEEEKVKQQNTQKERAATLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAFSSGNGKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKQKLCCLGGDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLENDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDSQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQIQELHKNVVNQYKKYYKLNTPVPSQEDC
MYWYNFLAYHMAGANMQKELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKNSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGAFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDKQRIASCGADKTLQVFKAESGERLLEISAHDDEILC
CAFSADGEFVATCSADKKVKIWNSRTGRCRCVYEEHSEQVNCCQFNNRSGQYLLATCSND
TFIKRSCKSLCLCKMEVKYSYDLISRWKKEAFVLTSWMSQELHLLSETDTLEQLWDLNKK
YCRNTMMGHVNSVSHCRFSPNDECVASCSTDGTVKLWETRSANELKSIEIKDFFKNADEE
PDDVEVLVKCCSWSRNGDMILVVAKNKLLLFDVKTCDLLAQVIVSHHSTIQYCDFCPGDE
LVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSDDQTIRIWETKK
VCKSSDAVLKSELDVVFRNGEVMILAIYNQKHLQLINGNTDSVIMQTAAQESLISCCCLS
EDLKFAAFGQESGTIKVLQLLDGKVLKSREAYRTSVQHCRFTSDCQTLISSAHDSVIQVW
NWQLSECVFLRGHKEAIKDFRLLENSKLLSWSFDGTVKVWNIATGNIEKDFACHGGTVLS
CAVSPDGSKFSSTSADKTAKIWSFESSSVLHELKGHEACVRCCTFSPNNKLLATGDDKGE
IRIWDILTGALLHFCSPVTVDEEEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWNVTTGES
LQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKL
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagagtagaaattgtttacttaccaatcgccaagcgttggaaaaagacatc
aagacctcttatattatggatcatatgatttctgatgaagtgctgacattacaggaggag
gagaaagtgaaacaacagaatacacagaaggagcgagcagctacgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgcttcatgaagggtac
agagatcttgctgctcttcttcaggatggcatccctgccttctcctctggtaatggaaag
agttcaatggatggaatgacttcatacgttaagacaattctctgcgaaggaggtgtacca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaaacagaaactc
tgctgcttgggaggtgatccaggctgggttacagtttatggaatggcaggttgtgggaag
actgttttaacagcagaagctttaagggatcatcagctcttggaagattactttccagga
ggagttcactggatctctgttggaaaacaggacaaagcagggctcctgataaaacttcag
aatctctgtagtagattagaaaatgactctactctttcacaaaggccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgctacgcaaatatcccagatctcttttg
gtcctggatgacatttgggattcctgggtattaaaagcatttgatagtcaatgtcaggtt
cttatcaccagcagggacaggagtgtaacagatgctgtggctggcaataaatatgaggtt
cacgtggaaagtggactagcacatgagaaaggactggagattttatccctattcgtgaat
atgaaaatatcagaactgccagaacaagctaactgccttgtaagggaatgcaaaggttct
cctcttgtgatatccttgataggtgcgttattacgagacttccctagtcgttgggaatac
tatctcaaacagctgcagaataagcagtttaaaagaataagaaaatcttcttcttatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaactgaatgacaactataaa
gactactataaagacctctctatccttccaaaagatgttaaagtacctaccaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatctctattgttctgtgatcgtaatgggaagtcattccattattatttacatgatctt
caacttgactttcttacagagaagaatcgcaaccagattcaggagctacataaaaatgta
gtaaatcagtacaagaagtactacaaacttaatacgcctgttccatctcaagaggattgc
atgtactggtataactttctagcgtatcacatggctggtgccaacatgcagaaggaactc
catgatcttatgttttctctagattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaagaatagcacagta
cgtgagaacttccaggaatttctgtctttaaatgggcaccttcttggacggcaaccattt
cctgacattatacagctgggtctttgccaaccagagacatcagaggtgtatcaacaagcc
aagctacatgctcaaagagaaacaggagcattttatttggaatggataaataaaaaatcc
ttgaagaacctctaccgtctggttgttcgtccacatagagatgcagtttaccatgcctgc
ttttctaaggataaacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggagataagtgctcatgatgatgaaatactttgt
tgcgctttctctgcagatggtgaatttgtagcaacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggccgttgtaggtgtgtatatgaagaacactcagagcaggtc
aattgctgccagttcaataacagaagtggtcagtatcttttagccacctgttcaaatgac
actttcatcaaaaggtcttgcaagagcttgtgtttgtgtaaaatggaggtaaaatacagt
tatgatctgatatcaagatggaagaaagaggctttcgtgctgacctcctggatgtctcag
gagttgcatttgctgtctgagactgacaccctggaacagctttgggacttgaacaaaaag
tattgtagaaatacaatgatgggtcatgtaaattccgtcagtcactgtagattttcacca
aatgatgagtgtgttgctagctgctcaacagatggaacagtaaagctttgggaaacacgc
tcagcaaatgaactgaaaagtattgagataaaagatttcttcaaaaatgcagatgaggaa
ccggatgatgtggaggttttagtaaaatgttgctcttggtccagaaatggtgacatgatt
ttggtggtagccaaaaataagcttttgctttttgatgttaaaacatgtgatttattagca
caagtcatcgtaagtcatcacagtactatccaatactgtgacttttgtcctggtgatgag
ttagtagcagttgccttgtctcactgttctgttgagttatggaatattaaatctttatca
aaagtagcatattgcaggggacacatgagctgggttcactgtgtgacattttcaccagat
ggatcattatttctgacatcatctgatgaccagacaatacgcatttgggaaacaaagaag
gtgtgcaagtcttctgatgctgtgctaaaaagtgaactagatgttgtatttcgcaatggt
gaagtgatgattttagcaatttacaatcagaagcatttacaacttatcaatggaaataca
gacagtgttattatgcagacagcagctcaagaatccctcatttcctgctgttgcttaagt
gaagatcttaaatttgcagcttttggacaggagagtggaacaataaaggtattacagttg
ttggatgggaaagttctgaagtcccgggaggcctacaggacatccgtgcagcattgtcga
tttacctctgattgtcagactctcatttcaagtgctcatgattcagttatacaggtatgg
aattggcagttgagcgaatgtgtgtttctaagagggcacaaggaagcaatcaaggatttt
agacttctggaaaattcaaaacttctttcttggtcatttgatggaaccgttaaggtttgg
aatattgctactggaaacatagaaaaagattttgcttgccatggaggtactgttctttcc
tgtgctgtttcacctgatggtagtaaattttcatctacttctgctgacaaaactgcaaag
atatggagctttgaaagttcatctgttcttcatgagctgaaaggtcatgaagcctgtgtg
cggtgctgtactttctctcctaataacaaattattggccactggagatgacaaaggagaa
ataaggatttgggacattttaacaggtgcattacttcacttctgctccccagttactgta
gacgaagaagaaccaacacatggtggttgggtaacagacctctctttttctcctgacagt
aaaatgcttgtgtcatctggaggctatcttaagtggtggaacgtaactactggagagtcc
ttacaaaccttctacacaaacggaacaaacctgaagtcaatacatgtgtcccctaatttc
aaagtgtatgtgactgttgataatcttggtattctttatgtattacagaagttgtga
DBGET
integrated database retrieval system
