Mycteria americana (wood stork): 142410054
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Entry
142410054 CDS
T11228
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142410054 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mame03000
]
142410054 (KDM2A)
04121 Ubiquitin system [BR:
mame04121
]
142410054 (KDM2A)
03036 Chromosome and associated proteins [BR:
mame03036
]
142410054 (KDM2A)
Enzymes [BR:
mame01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
142410054 (KDM2A)
Transcription factors [BR:
mame03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
142410054 (KDM2A)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142410054 (KDM2A)
Chromosome and associated proteins [BR:
mame03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
142410054 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
142410054 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
142410054
NCBI-ProteinID:
XP_075358051
LinkDB
All DBs
Position
5:complement(2134490..2186380)
Genome browser
AA seq
1207 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEEEDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEAEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSESVNMEEEEEEEEEE
DAAGKEPRRPVTRRSILTSPIANGANVDYDELGRSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPNGGSPRKNRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGIPIVQWPQRDKLKLQARLRVRLPTIPITKPHTMKPTPRPTPVRP
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDGEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSTNLQHSPRVVMRHAPTRMPLRGGGEEEAA
AEEEEEEDEEEDENAEEGGAARLNGRGGRAQEGEESWMQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggag
gaagacagcagtcctggagtgtccttctcactctcttcagaagagtcggagatggagccc
gaggaagaaaggatccggtacagccaaagactgcgtggcacaatgaggcggcgttacgag
gacgatggcatctccgatgatgaaattgaagggaagaggacatttgacctcgaggaaaag
ctgtccaccaacaagtttaactccaccttcgtggtcttcatggaaggcaaagacttcaca
gttgaatacatccagcggggtggcctgagagaccctctcatcttcaggagctctgacggc
ctgggaataaagatgccagatccggacttcagtgtgaatgatgtgcggctgtgtgttggg
agccgacggatggtggatgtcatggatgtgaacacgcagagggatattgagatgtccatg
gcacagtgggcacgctactacgaaacaccggaggccgagcgggagaaactttacaatgtc
atcagcctggagttcagccacaccaaactggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccagacacctgaaggagagtcagacagag
tctacgaatgctatcctggagatgcagtatccaaaggtgcagaaatactgtctgatgagt
gtcaagggctgctacacagatttccacgtggactttggtggtacttctgtgtggtaccat
atccaccgagggggaaagatcttctggctgatccctcctacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatttttcttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttggaggcaacttcttacacagcttc
aacatccctatgcagcttcggatctacagcattgaagaccgcacgcgggtcccaaataag
tttcgttatcccttctattacgagatgtgttggtacgtgctggagcgttatgtctactgc
atcaccagccgctcacatctgaccaaggacttccaaaaggaatcgctcagtatggacatg
gagctgagctcctcggagtcggtaaacatggaagaggaggaggaggaagaagaggaggag
gatgcagcaggaaaggaacccaggcgaccggtcacaaggcggtccattctcaccagcccc
atagccaatggtgccaatgtggactatgatgaactgggcaggagctgccggagcagcctg
ccaggtctgaagaagaccccatctatagactcttccgactccagccggggctcccaaaac
ggccaggcctgggacccgaacggtggcagcccacgcaagaacaggaaggtgcacctgacg
cagtttgagctggaggggctgcgctgcctcgtggacaaactggagtcactccctctgcac
aagaagtgcgttcccaccggcattgaggatgaggacgccctcatcgctgatgtcaagctg
ctgctagaagaatacgcgaacagcgaccccaaactggcacttacaggcatccccatcgtc
cagtggccccagagagataagctaaagctccaggcccggctgagggtgcgcctgcccacc
atccccatcaccaagccacacaccatgaagccaaccccccgcccgacacccgtcaggcct
acggtctctcccatcgtgtcaggcgccaggcggaggcgggtgcggtgccgaaaatgcaag
gcttgcatgcagggcgagtgtggcatgtgccactattgcagggacatgaagaagtttggc
gggcctggccgcatgaagcagtcctgcgtcctccggcaatgcttagcgcccaggctgcct
cactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcgcaggacttt
gagaagaaactcatggagtgctgcatctgcaatgaaattgttcaccctggctgcctgcag
atggatggggaagggctgctcaacgatgagctccctaactgctgggagtgccccaaatgc
taccagggtgacgacggagagaagggccagaagcggaaggtggaggagagcgacgatgac
acggcgcaagccaaggtgctgcggcccctgcggagttgtgaggagcccctgacccccccg
cccaactcgcccacccccatgctgcagctgatccacgacccagcgtcgccgcgaggcgtg
gtgacgcgctcgtccccgggagccggccccagcgaccaccacagcgccagcagagacgag
cgcttcaagcgacggcagctgctgcggctccaggctaccgagcgaaccatggtgcgggag
aaagagaacaaccccagcggcaagaaggagctgtcagaggtggagaaggccaagctgcac
ggctcctacctcacggtgacgctccaacgccccaccaaagacgtccacggcacttctatc
gtccccaagctgcaagccatcacagcctcctccaccaacctgcagcactctccccgcgtg
gtcatgcgccacgcacccaccaggatgcccctgcggggcgggggggaggaggaggcagcc
gctgaggaggaggaggaggaagacgaggaggaggacgagaacgcggaggaggggggggcg
gcccggctcaatggccgagggggccgggcgcaggagggcgaggagagctggatgcagcgc
gaggtgtggatgtccgtcttccgctacctcactcgcagggagctctgcgagtgcatgcgg
gtgtgcaagacctggtacaagtggtgctgtgacaaaagattgtggacaaagatagatttg
agcaggtgcaagtccatcaccccccaggcgctgagcggcatcatcaaaagacagccggtc
agcctcgacctcagctggaccaatatctccaaaaaacagcttacgtggctcgtcaacagg
ctgccaggcctgaaagacctcatcttagcgggctgttcctggtctgcagtctgtgctctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacgcctccgacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgatttccggctcgccggcctggacatcaccgacgccacg
ctgcggctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
caccttacggaccagtcagccaacctcctcacagccgtgggctcttccacacgcaactcc
ctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctgtacctg
cgccgcatctccaacgtcactctaatcgacctgcgaggttgcaaacagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgatgag
aagctgatccaaaaaatcagctag
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