Mycteria americana (wood stork): 142410274 Help Entry 142410274         CDS       T11228                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism mame  Mycteria americana (wood stork) Pathway mame04010   MAPK signaling pathway mame04120   Ubiquitin mediated proteolysis mame04140   Autophagy - animal mame04144   Endocytosis mame04620   Toll-like receptor signaling pathway mame04621   NOD-like receptor signaling pathway mame04622   RIG-I-like receptor signaling pathway mame05132   Salmonella infection mame05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:mame00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     142410274 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     142410274 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     142410274 (TRAF6)    04140 Autophagy - animal     142410274 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     142410274 (TRAF6)    04621 NOD-like receptor signaling pathway     142410274 (TRAF6)    04622 RIG-I-like receptor signaling pathway     142410274 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     142410274 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     142410274 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mame04131]     142410274 (TRAF6)    04121 Ubiquitin system [BR:mame04121]     142410274 (TRAF6) Enzymes [BR:mame01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      142410274 (TRAF6) Membrane trafficking [BR:mame04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     142410274 (TRAF6) Ubiquitin system [BR:mame04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     142410274 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF SlyX Med21 RING_XB3-XBAT31 PspA_IM30 TRAF3_RING zf-RING_11 DUF4455 HAP1_N CENP-F_leu_zip U-box UPF0242 Spc29 ATG16 DUF1664 CEP104_ZnF DUF16 DUF2730 PUMA_CC HMMR_N ADIP DM Motif Other DBs NCBI-GeneID:  142410274 NCBI-ProteinID:  XP_075358620 LinkDB All DBs Position 5:complement(25079994..25103090) Genome browser AA seq 545 aa AA seqDB search MSLLYSDNSCGARDLESGCCAAMASACSVGVKEDSVSVSSGTGNPPSSFTEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGAFQKNHLKEHMTQ ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQCFQNISVTATNPVPFINGLPFEPAL FSHVSHATYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS TDGAM NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctatatagtgataacagttgtggagcacgagacttggaaagcggctgctgt gcagccatggccagtgcctgcagcgttggagtgaaagaagacagcgtaagcgtcagcagt gggactggaaaccctccaagttctttcacagaggaaacacaaggatatgatgtcgagttt gatccgcccttggaaagtaaatatgaatgtcctatctgtttgatggctcttcgggaagca gtgcagacaccatgtggacaccgtttctgcaaagggtgcattgtcaaatcaataagagat gcaggtcacaaatgtccagtagacaacgaaattctgctcgaaaatcaactttttcctgac aactttgctaaacgagaaatcctttccttaatggttaagtgtcccaacaagggctgcagt atgaagatggagctgaggcatttagaggaccaccagttgcagtgtgatttttccactgtg gaatgcccacagtgccaaggagccttccagaagaaccatctgaaagagcacatgacacag gagtgtccaaggcgtcaagtctgttgtccaaactgtgccacttctatggcctatgaagat aaagagcttcatgaccaaacctgcccacttgccaatgtattctgtgaatattgcaacaca gtgctgatcagagagcagatgcctaaccattatgacaatgattgtcctactgccccagtg ccatgtttttacagtgcctttgggtgccctgaaaagatgcaaaggaatgaactggcacga catatgcaggagttcactcaggttcacatgagaatgatggctcagtgttttcaaaatatc agtgttactgctacaaatcctgtacccttcatcaatggcctaccctttgagcctgccctc ttctcacacgtgtcacatgccacatatgattgtaatccagaagttgaaaacttcaaagaa actattcagcagttggaaggtcgtctggtaagacaagatcaccaaatcagagaactcatt gctaaaatggagactcaaaacactcacatggcagaactcaaacgtactatccgaaatttg gagggaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaagatt gagaacttcagtggacttcagaaagcccaggaagaagagagacccgttgtgatgcacagt cctggcttctacactggaaagcctggctacaagctgtgtttgcgcctgcatatccagtta ccaaatgctcagcgttgcgctaattttatatctctgtttgtccacactatgcaaggagaa tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa tcagaaggccctgaaaggcagaatcatgaagaagtaatggaagccaagccagagttacta gccttccagagaccaacaattcaccgcaatccaaaaggttttggttatgtgactttcatg cacctgcaaaccttgaaacaaagaaccttcgtaaaggatgatacccttctggtgcgctgt gaagttctaacgcgtctagatttaaacagtctccgcagagaaggatttcaagctcgcagt actgatggagctatgtag

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