Mycteria americana (wood stork): 142410898
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Entry
142410898 CDS
T11228
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mame00536
]
142410898 (SLIT1)
Glycosaminoglycan binding proteins [BR:
mame00536
]
Heparan sulfate / Heparin
Axon guidance molecules
142410898 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRRCT
hEGF
LRR_14
LRR_1
LRR_9
EGF_TEN
EGF_Teneurin
LRR_EndoS
EGF_4
EGF_CA
EGF_2
EGF_DL_JAG
LRRCT_2
FNIP
Motif
Other DBs
NCBI-GeneID:
142410898
NCBI-ProteinID:
XP_075360192
LinkDB
All DBs
Position
6:complement(16756972..16820684)
Genome browser
AA seq
1538 aa
AA seq
DB search
MAAPTPGGAAGVPAGLRAVAWLLACAALCRGRAAACPPLCACSGTTVDCHGTALRAVPKS
IPRGTERLELNGNNITRINKNDFAGLKQLRVLQLMENQISMVERGAFDDMKELERLRLNR
NQLHTLPELLFQNNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFR
ALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGL
FTQCAAPAQLRGLNVAEIQKNEFSCSGQMDPARAQLCSLSSGSCPAMCTCSNGIVDCRGK
GLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRS
LNSLVLYGNKITELPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQ
SLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPRRLANKRIG
QIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVICPPKCRCESSVVECSNLKLTKIPERI
PQSTAELRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEDGAFEGASSVSELHLTV
NQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFD
TLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFR
CEEGQEETSCIPRPQCPQECTCLDTVVRCSNKHLKTLPKGIPKNVTELYLDGNQFTQVPG
QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLS
LHGNDISSLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSSWVKTGYKEPGIARCAGPPD
MEGKLLLTTPAKKFECQGPPALSVQAKCNPCLSSPCQNQGTCHNDPLGFYRCACPSGYKG
RDCEVALSGCSSNPCANGGTCQPQEGEGAGFRCLCPVGFEGPSCRTASDPCKEHSCENGG
SCVPRATNYTCLCPARYTGDFCEQPPDFCSAELSPCQHGSTCISTSQGPRCECAPGYVGS
NCSEDFDDCQDHRCQNNARCLDEVNGYSCLCTEGYSGQLCEMPPRAAGQPGLCERAECQN
GALCVERGARALCQCLPGFGGPKCEKLLSVNFVDRDTYLQFTDLQDWPRANITLQVSTAE
GNGILLYNGDSDHMAVELYQGHVRVSYDPGTHPSSAIYSAETINDGQFHTVELVTFDQMV
NLSIDGGSPMTMDNSGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQLLNGTSFHGCIRNLY
INNELQDFTKTRMTPGVVPGCEPCRKLYCLHGICQPAGAQGPVCHCEPGWDGPHCDQPRG
GPCQGHKCVHGLCLPLDALSYSCQCREGYQGALCNQPAEPPDPCRRQPCVHGHCRLTPGG
QPTCECHSGYAGALCDQELECHGEPVRDYHQVQRGYAICQTTRPVAWVECRGACGGPGTG
CCTGLRLRRRKYAFECSNGATFVEEVEKPSKCGCSQCL
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgacccccgggggggcggcgggggtcccggcggggctgcgggccgtcgcc
tggctgctggcctgcgccgcgctgtgccggggccgcgccgccgcctgcccgccgctctgc
gcctgcagcggcaccacggtggactgccacggcacggccctgcgcgccgtgcccaagagc
atcccccgcggcaccgagcgcctggagctcaatggcaataacatcacgcggatcaacaag
aatgacttcgctgggctgaagcagctccgtgtcctgcagctgatggaaaaccagatcagc
atggtggagcgtggggcgttcgatgacatgaaggagctggagcggctacggctgaaccgc
aaccagctgcacacgctgcccgagctcctcttccagaacaaccaggcactgtcacgcctg
gacctgagcgagaacttcatccaggccatccccaggaaagccttccgtggggccaccgac
ctcaagaacctgcaactggacaagaaccagatcagctgcatcgaggatggggctttccgc
gccctgcgggggctggaggtcctgaccctgaataacaacaatatcacttccatccccgtg
tccagcttcaaccacatgcccaagctgcggacgttccgcctgcactccaaccacctcttc
tgcgactgccacctggcctggctctcgcagtggctgcgccagcgccccaccatcgggctc
ttcacccagtgtgccgctccagcccagctccgcggcctcaacgtggccgaaatccagaag
aacgagttcagctgctccggacaaatggacccggcacgtgcccagctctgcagcttgtcc
tctggctcctgcccggccatgtgcacttgcagcaacggcatcgtggactgtcggggcaag
gggctgacggccatccccgccaacctgcccgagaccatgacggagatacgcctggagctc
aacggcatcaagtccatccccccaggcgccttctccccctacaagaagctgcggaggata
gacctgagcaacaaccagatctcagagatcgcccccgatgccttccagggactgcgctcg
ctgaactcgctggtgctgtacggcaacaagatcacggagctccccaagggcgtctttggg
ggacttttcgccctgcaactgctgctcctcaacgccaacaagatcaactgcgtgcgggcg
gacgccttccaggacctgcagaacctctcgctgctctcgctctatgacaacaagatccag
agcctggccaagggcaccttcacctccctgcgggccatccagaccctgcacctggcccag
aaccccttcgtctgtgactgcaacctgaagtggctggcagacttcctccgcgccaacccc
atcgagaccagcggtgcccgctgtgccagcccccggcgcctggccaacaagcgcatcggc
cagatcaagagcaagaagtttcgctgctcggccaaagagcagtatttcatcccagggacg
gaggattaccagctgaacagcgagtgcaacagcgacgtgatctgccccccgaagtgccgc
tgcgaatccagcgtggtcgagtgctccaacctgaagctcaccaagatcccggagcgcatc
ccgcagtccacggccgagctgcgcctgaacaacaacgaaatttccatcctggaggccact
ggcatcttcaagaaactcccgcatctcaagaaaatcaacctcagcaacaacaaggtgtcg
gagatcgaggacggggcgttcgagggggcatcctccgtcagcgagctgcacctcaccgtc
aaccagctggagtcggtgcggagcggcatgttcaggggcctggatgggctgaggaccctg
atgctgaggaacaaccgcatcagctgcatccacaacgacagcttcacggggctgcgcaac
gtccgcctgctctccctgtacgacaaccagatcagcaccatcgcgccaggcgccttcgac
acgctgcagtccctctccacgctgaaccttctcgccaaccccttcaactgcaactgccag
ctggcctggctgggggactggctgcgcaagaggaagattgtgacggggaacccgcggtgc
caaaaccccgacttccttcggcagatcccgctccaggacgtggctttccccgacttcagg
tgtgaggaaggtcaggaggagaccagctgcatcccccggccccagtgcccgcaggagtgc
acctgcctcgacaccgttgtccgctgcagcaacaagcacctcaagaccctgcccaagggg
atccccaagaacgtcacggagctctacctggatggaaaccagttcactcaggtcccgggg
cagctctccaccttcaagtacctgcagcttgtcgatctgagcaacaacaagatcagctcc
ctgagcaactcctccttcaccaacatgagccagctcaccaccctgatcctcagctacaac
tccctgcagtgcatccctccgctggcctttgagggcctccgctccctccggctgctgtct
ctccacggcaatgacatctccagcctccccgagggcatcttcgcagatgtcacctccctg
tcccacctagccattggggccaaccccctgtactgcagctgcaacctgcgctggctctcc
agctgggtcaagacggggtacaaggagccaggcatcgcccgctgcgctgggccccctgac
atggaaggcaagctgctgctcaccacccccgccaagaagttcgagtgccaaggccccccc
gctctgagcgtccaggccaagtgcaacccctgcctctccagcccctgccagaaccagggc
acgtgccacaacgacccccttggcttctaccgctgcgcctgccccagtggctacaagggc
agggactgcgaggtggcactcagcggttgctcctccaacccctgcgccaatggggggacc
tgccagcctcaggagggggaaggagccgggttcaggtgcctgtgcccggtgggcttcgag
ggcccgagctgccgcaccgccagcgacccctgcaaggagcacagctgcgagaacgggggc
tcctgcgtgccccgtgccaccaactacacctgcctgtgccctgcccgctacacaggggat
ttctgtgagcagccgccggatttctgctcggccgagctcagtccgtgccagcacggctcc
acctgcatctccaccagccaggggcccaggtgcgagtgcgcgcccggctacgtggggagc
aactgcagcgaggacttcgacgactgccaggaccaccggtgccagaacaacgcccgctgc
ctggacgaggtgaacggctactcctgcctctgcaccgagggctacagcggccagctctgc
gagatgccgccccgcgccgctggccagcccggcctttgcgagcgagccgagtgccagaac
ggggccctgtgcgtggagcggggtgcccgcgccctctgccagtgcctgcccggcttcggc
ggccccaagtgcgagaagctgctgagcgtcaacttcgtggaccgcgacacgtacctgcag
ttcaccgacctgcaggactggccccgggccaacatcaccctgcaggtctccacggctgaa
ggcaatggcatcctgctgtacaacggcgacagcgaccacatggcagtggagctgtaccag
ggccacgtcagggtcagctacgaccccggcacccaccccagctcggccatctacagcgcc
gagaccatcaacgacgggcagttccacaccgtggagctggtgaccttcgaccagatggtg
aacctctccatcgacggcggcagccccatgaccatggacaactcgggcaagcactacacg
ctgaacagcgaggcccccctctacgtgggagggatgcccgtggacgtcaactcggccgcc
ttccgcctctggcagctcctcaacggcaccagcttccacgggtgcatccgcaacctctac
atcaacaacgagctgcaggacttcaccaagacgcggatgacgccgggggtggtgccgggc
tgcgagccctgccgcaagctctactgcctgcacggcatctgccagcccgccggcgcccag
ggccccgtctgccactgcgagcccggctgggacgggccccactgcgaccagccccgcggc
ggcccctgccaggggcacaagtgcgtgcacgggctgtgcctgcccctcgacgccctctcc
tacagctgccagtgccgcgagggctaccagggcgccctctgcaaccagcccgccgagccg
cccgacccctgccgccgccagccctgcgtccacggccactgccgcctcaccccaggcggc
cagcccacctgtgagtgccacagcggctacgccggagccctctgcgaccaagagctggag
tgccacggggagccggtgcgggactaccaccaggtgcagcggggctacgccatctgccag
acaacgcggccagtggcctgggtggagtgccggggggcctgcggtggccccggcaccggt
tgctgcaccgggctgcggctccggcgcagaaaatacgccttcgagtgcagcaacggcgcg
accttcgtggaggaggtggagaagcccagcaagtgcggctgcagccagtgcctgtga
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integrated database retrieval system
