Mycteria americana (wood stork): 142413360
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Entry
142413360 CDS
T11228
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame04010
MAPK signaling pathway
mame04020
Calcium signaling pathway
mame04510
Focal adhesion
mame04518
Integrin signaling
mame04540
Gap junction
mame04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142413360 (PDGFRB)
04020 Calcium signaling pathway
142413360 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
142413360 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142413360 (PDGFRB)
04540 Gap junction
142413360 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
142413360 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mame01001
]
142413360 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mame04090
]
142413360 (PDGFRB)
Enzymes [BR:
mame01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
142413360 (PDGFRB)
Protein kinases [BR:
mame01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
142413360 (PDGFRB)
CD molecules [BR:
mame04090
]
Proteins
142413360 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
BACON_2
Motif
Other DBs
NCBI-GeneID:
142413360
NCBI-ProteinID:
XP_075365539
LinkDB
All DBs
Position
8:complement(7438123..7472733)
Genome browser
AA seq
1093 aa
AA seq
DB search
MLSPSLKTSLWLLILTGLLEVTSGGSGLHIEPGDAELVLGLHSTFSLLCYGDAALVWERE
GQSLAASLEHRDGVFLSNLTLRNVTGHHTGEYACTYSPDHAPEPAERKALYIYVPDPSLV
FLPTITSEEVFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPAAYDPQQGFKGFFED
KTYFCRTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGENITLMCTVSGNELVNF
DWDYPRKQAGKVVEPVTDFLPGSTHEIRSILTIQNVELEDSGTYVCNVSEGYHEKTDRKD
IMVQVIERGFVRFHTRLPSMVYAEVHKSHTIQVEVEAYPQPSIVWLKNNKTLTMESNSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNESAEIGLQTNTTYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAEVYGNTAKEDHV
QSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNTRLTPSSPTSSILYTAVHQNGGENDYI
IPLPDPKPEAICDLPQEASISRASSTLNEANTSSTISCDSPLGLRQDEEQESDPQPGCQE
LTTGHQEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcccctctctgaagacatctctctggctcctcatcctcaccggtctgctggag
gtaacgtctgggggcagcgggctgcacatcgaacccggagacgctgagcttgtcctcggc
ctccacagcaccttctccctcttgtgctatggggacgccgcgctggtctgggaacgggag
ggtcagtccctcgccgcctcgctggagcacagggatggtgtcttcctcagcaatctcacc
ctcaggaacgtgacgggccatcacaccggggagtacgcgtgcacctacagccctgaccac
gctccagagccagcggagaggaaagccctgtacatctacgttccagatccctccctagtc
ttcctccccacaatcacctccgaagaggtcttcatcttcatcacgggctacacagaggcc
gtcatcccatgtcgtgtgaccaacccgcagatgcaggtgaccctctatgagaaaaaggtg
gagaaccccatcccagctgcttatgacccacaacagggattcaaaggcttctttgaggat
aagacctatttctgccggacaattgtggatgaccaggaggtggattcagacaccttctac
gtctacaggatccaggtctcatctgtgaacgtctccatcagtgcagtgcagaccatagtg
cgtcagggagaaaacattaccctgatgtgcaccgtgagcggcaatgagctagtcaacttc
gactgggattatccccgcaagcaagcagggaaggttgtggagccggtgaccgacttcctg
cctggatccacccatgagatccgctccatcctcaccatccagaatgtggagctggaggac
agtgggacctatgtctgcaatgtctctgagggctaccatgagaaaacagatcggaaagac
atcatggtccaagtgattgagcgtggcttcgtgcgcttccacacccgcctgcccagcatg
gtgtacgctgaggtccacaagagccacaccatccaggtagaggtggaagcctacccgcaa
cccagcattgtgtggctgaagaacaacaagacattgaccatggagagcaacagcgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtgcgg
gtgaagcaggaagaaggaggattttacaccatccgggcttccaatgaggacgatgagcag
gagctgtccttccatctgcagataaatgtgccagctaaagtggtggatctcaaggagaac
agcagtgccagcagtggggagcagaccgtaacatgctctgctgaaggcatgccccagcca
gagatcagctggtctacttgcagcgacataaaatggtgcagcaccaaggggcagcccacc
cggctgctggggaacgagtctgcggagattggtctgcagaccaacaccacgtaccatgcg
gagctgcaggtgtaccgcgtgaacagcaccctgcagctgcacagggtggacgagcccctg
ctcctgaggtgcactgtgcaaaacttcctgggcaccaactcccaggacatcactctggtc
ccacacgccttgccgttcaaagtggtcatcatctctgtcatcctggccttgctggtcctc
accgtcatctccctgatcatcctgattgtcctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgattgagtcagtcagctccgatgggcacgagtacatctacgtggatccc
atgcagctcccttacgactccagctgggaggtgcccagggacaagctggtgttaggacgc
actctcggctccggtgcctttggacgcgtggtggaggcaacagcccacggcctgagccat
tcgcagtccaccatgaaagtggcagtcaaaatgctcaagtccactgcccggagcagcgag
aagcaagccctcatgtccgagctgaagatcatgagccacttgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggagggcccatctatatcatcaccgagtactgc
cgctatggggatctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctac
ggagagaaggcacggcgagaggcagaggtgtatgggaacactgccaaggaggatcatgtc
cagagtcacctctccttgtctgtggagagcgatgggggctacatggacatgagcaaggat
gactccctggattatgtgcccatgtccgacatgaagggtgaagtcaagtacgctgacatc
gagtcctctaactacggcaccccgtatgagctggacagctattccccgtcagctcctgaa
agaacagaccgggtgacactgataaacgagtctccgctcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaactgtgtgcat
cgtgacctggctgccaggaacgtcctcatctgcgaggggaagctggtgaagatctgtgac
tttggcctggcgagagacatcatgagggattccaactatatctccaaaggcagcaccttc
ttgccccttaagtggatggctccagagagcatcttcaacaacctctataccaccctgagc
gatgtgtggtcctttgggattctcctctgggagatattcactctaggggggactccatac
cctgaactgcctatgaacgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aaacccacccacgcctctgatgaaatctacgatattatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacagctggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccctgct
gttgtccgcacaagacccacaatccctgggctgaacaacaccaggctcactcccagctcc
cccaccagcagcattctctacacagctgtgcaccagaacgggggcgagaacgattatatc
atccctcttcccgaccccaaacccgaggcaatctgcgatctccctcaggaggcctccatc
agccgggccagctctacactgaacgaggccaacacatcgtctacaatatcctgtgacagc
cctctgggcctccggcaggatgaggagcaggaatccgacccacagccaggctgccaggag
ctgaccacagggcaccaagaggtggaagagagtttcctgtag
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