Mangrovimonas sp. YM274: RBH95_08680
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Entry
RBH95_08680 CDS
T09317
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mang
Mangrovimonas sp. YM274
Pathway
mang03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBH95_08680 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mang03400
]
RBH95_08680 (nth)
Enzymes [BR:
mang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBH95_08680 (nth)
DNA repair and recombination proteins [BR:
mang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBH95_08680 (nth)
Prokaryotic type
RBH95_08680 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WMI67219
LinkDB
All DBs
Position
complement(2010977..2011636)
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AA seq
219 aa
AA seq
DB search
MTKQEKVDFVITTLKDLYPTIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFERAD
NPYDMVKLSIEEIRDIIKPVGLSPMKSKGIHGLSEILIEKHNGEVPQTYEALEALPAVGH
KTAAVVLSQAFGIPAFPVDTHIHRLMYRWNLSNGKNVTQTEKDAKRLFPEALWNDLHLQI
IWYGREYSPARGWDLDKDIITKTIGRASVINDYYKMKKP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaagaaaaagtggactttgtaattaccactttaaaagacctatatccaaca
attcctattccattagaccataaagacccctacactctattgattgcggtgctaatgtct
gcacaaagtaccgatgtaagagtcaaccaaattacgcctttactgtttgaaagagctgat
aacccatatgatatggttaaactttcaattgaagaaataagggacattataaagcccgta
ggcctgtctcctatgaaaagtaaaggtattcatggcttatcggaaattttaattgaaaaa
cataatggcgaagtgccacagacgtacgaagcattagaggcattacccgccgtaggccat
aaaacagcggcagttgtactttcccaagcctttgggattccagcttttccagtagacact
cacatacaccgattgatgtaccgttggaatttgagcaatggcaaaaacgtgacacaaacc
gaaaaggatgccaaaagattgttcccagaagcattatggaatgaccttcacttgcagatt
atttggtacggaagagaatactctcctgccagaggttgggatctcgacaaagatattatt
accaaaaccattggtagagcttctgtaatcaatgactattataaaatgaaaaagccctga
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