Mirounga angustirostris (Northern elephant seal): 123846355
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Entry
123846355 CDS
T11530
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123846355 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mano03037
]
123846355 (PCDH15)
04515 Cell adhesion molecules [BR:
mano04515
]
123846355 (PCDH15)
Cilium and associated proteins [BR:
mano03037
]
Primary cilia and associated proteins
USH complex and associated proteins
123846355 (PCDH15)
Cell adhesion molecules [BR:
mano04515
]
Cadherins
Protocadherins
123846355 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_FAT4_N
CDH23_a-b
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
123846355
NCBI-ProteinID:
XP_045733644
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MLRQFYLWKWLASGIILAALFTICFSQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLLDPVQQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTVIYHEVRIVVRDRNDNSPTFKHENYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNPNDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPVFLPCVLVPNTPDCRPLTYQAAIPELRTPEELNPITV
TPPIQAVDQDQNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL
TSPLRIVALDKDIEDVPPGGIPMKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREE
QQTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYNVYLYTDMSPGDSVIQLTA
VDADEGSNGEITYEILVGAQGDFIINHTTGLITIAPGVALTVGRTYALTVQAADNAPSAE
RRHSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRIGAVLLNLQATDREGDPISYTIE
NGDPQRVFNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDN
APVFDPFLPRNLSVVEEETNAFVGQVRATDPDAGINGQVHYSLGNFNNLFRITSNGSIYT
AVKLNREVRDYYELVVVAMDGAVHPRHSVLTLAIKVLDIDDNSPVFTNSTYTVVVEENLP
AGTTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPEQEASIT
FLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDA
DPPGLRASHVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGE
PVMSSSATVKILVLHPGEIPRFTQEEYRPPPVSELATRGTMVGVISAAAINQSIVYSIVS
GNEEDMFGINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIE
IQDENDHPPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSAMAYRLIIPPIKEGKE
GFVVETYTGLIKTAMLFHNMRRSYFKFQVIATDNYGQGLSGKADVLVSVVNQLDMQVIVS
NVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAV
DPQTNRAIDRNELFKFLDGKLLDINKDFQPHYGEGGRILEIRTPEAVTSIKKRGESLGYT
EGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQSALPAAKPAAPAPAPVA
VPPPPPPPPGAHLYEELGDSTMYEMPQYGSRRRLLPPAGPEEYGEVVGEAEEEYEEEEEE
AKKIRKPKVQVREPSEEEEVVVTIEKPPPAKPTYTTWKRARIFPMIFKKVRGLADQRGLA
ELEGEEWQRHLEEVDKDYLKLTLDQDEATESTVESEESSSSDYTEYSEEESEFSESETTE
ESESETPSEQEESSTPESSEESESTESDGEKARKNIFLARRRPVVQEVKEVKGRKEEPPE
ELEEEPRVEEAGEESEQVLEEEPAGLEVPEEEEEGSVESASVGAGGDSEEDSEPGHSVSS
SESQSGGPWGFQVPEQATSKKAPREQPPGDDSEGDNTAL
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgctacgacagttttatctctggaaatggttagcttcagggattatcctcgcagccctc
ttcacaatctgcttcagccagtatgatgatgattgcaaactagctaggggaggaccgcca
gccaccatagttgctatcgatgaagagagtcggaacggtacgattctggtggataacatg
ctgatcaaagggactgctggaggaccagaccccaccatcgaactttccttaaaggacaac
gtggattactgggtgttgctggaccctgttcagcaaatgctcttcctgaacagcacgggc
agagttctggatagagaccccccgatgaacatacactccatcgtggtgcaagtccagtgc
atcaacaagaaggtgggcactgtgatctaccatgaagttcgaatcgtggtgagggacagg
aatgacaactcgcccacattcaaacacgagaactactatgccaccgtgaatgagctcact
ccagttggcaccacgatatttacaggattttcaggagacaatggagctacagacatagat
gatggaccaaatggacagatagaatacgttatccaatataatcctaatgatccgacatct
aatgacaccttcgaaattcccctcatgttaactggaaatgtggtgttaaggaagaggctc
aactatgaagataagactcggtactttgtcatcatccaagctaatgaccgtgcacaaaat
ctgaatgagcggcgaaccaccaccaccaccctcacagtggacgttctggatggagatgac
ttgggtcctgtgtttcttccttgtgtcctggtgccaaacacacctgattgtcgcccactc
acctaccaagccgccatccctgaattgagaactccggaagaactgaaccccatcaccgtt
accccgcccatccaagctgttgaccaggaccagaatattcagccgccatcagataggcca
ggcatcctctactccatccttgttgggactcctgaggattacccacgatttttccatatg
catcctaggactgcagaacttagtctcctggagccagtaaacagagactttcaccagaaa
tttgatttggttattaaggctgaacaggacaatggccatcctcttcctgccttcgccagt
ctccatattgaaatcctggatgaaaacaatcagagtccgtatttcacgatgcccagttac
cagggctatatcctggaatccgccccagtgggagcaaccatctccgacagtctgaatttg
acctcccctctgaggattgtggctctggacaaggatatagaagatgtcccacctggtgga
attcctatgaaagacccagagcttcaccttttcctgaatgattacacctcagtcttcact
gttacacaaactggcattactcgctacctcaccttacttcagccagtggacagggaagaa
cagcagacttacactttttcgataacggcattcgatggtgtgcaggagagtgagccagtt
attgtcaatattcgggtgatggatgcaaatgataacactccaaccttccctgaaatatcc
tacaatgtctatctgtatacagacatgagccccggcgacagtgtcattcagctcacagcc
gtggacgccgacgaagggtccaacggggagatcacgtacgaaatcctggtgggggctcag
ggcgacttcatcatcaaccacaccacggggctcatcaccatcgccccgggggtggcactg
acggtggggcgcacctacgcgctcacggtccaggccgcggataatgcgccttccgcggag
agaaggcactccatctgcacggtgtacattgaagtgcttcctccaaataatcaaagccct
ccccgcttcccacagttgatgtacagcctcgaaatcagtgaagccatgaggattggtgct
gttttattaaatctacaggcaactgatagagagggagacccaatatcatacaccattgag
aacggagatcctcaacgagtttttaatctttcggaaactactgggattctaactttaggg
aaagccctggacagggagagcaccgatcgctacattctaatcatcactgcttcagacggc
aggcccgatgggacctctactgctaccgtaaatgtggtggtgacagatgtcaatgacaat
gcaccagtgttcgacccctttctgcctagaaacctgtctgtggtggaggaagaaaccaat
gcctttgtgggccaagtacgggcaacagaccctgatgctggaataaatggccaagtgcat
tatagtttgggcaacttcaataatctcttccgcatcacatccaatgggagcatttacaca
gctgtgaagcttaacagagaggtcagggactactacgagcttgttgttgtggccatggac
ggagcagtgcatccccgtcactcagtgctcacactggccatcaaagttttggatatcgac
gataacagtcctgtgttcaccaattcaacgtatactgtggtcgtggaggagaacctgccg
gctgggaccaccttcctccagatagaggccaaagatgttgaccttggagcaaatgtgtct
tatcggatccgaagcccagaagtaaagcacttttttgcactacatccatttacaggagaa
ctttcccttttaaggagcttggactatgagtcatttccggagcaggaagcaagcatcacg
tttctcgtggaggccttcgatatttatggaacgatgccaccaggcattgccactgtcaca
gtgatagtaaaggatatgaatgattatccgcccgtatttagtaaacggatctacaagggg
atggtggctccggatgccgtgaagggcacacccatcacaaccgtttatgctgaagatgca
gacccccctgggttacgtgcaagtcatgtgaggtacagagtagatgatgtccagtttcct
tatcctgccagtatttttgacgtagaagaagattctggaagagtaataactcgagtcaat
cttaacgaagagcctacaacaatttttaagctggtggttgttgcttttgatgatggtgag
cctgtgatgtccagcagcgccacagtgaaaattcttgtcttacatcctggagaaatccca
cgcttcacgcaagaggaatatagacctcctccagtgagtgaacttgccaccagagggact
atggttggagtgatttcagcagcggccatcaaccagagtattgtgtactccatagtttca
ggaaacgaagaagatatgttcggaattaacaacatcacaggtgttatctatgtgaatgcc
cccctggattatgagaccaggacaagctacgtacttcgcgtccaggctgattccctggaa
gtggtcctcgccaatctccgagtcccttcgaaaagcaatacggctaaagtgtatattgag
attcaggatgaaaatgatcatcccccagtgtttcagaaaaaattctacattggaggtgta
tctgaagatgcaaggatgtttacttctgtgctcagagttaaggctactgacaaagatact
ggcaattacagtgccatggcttaccgactcatcattccacccattaaagagggaaaagaa
ggatttgtggtggaaacgtatacggggctcatcaaaactgctatgctcttccacaacatg
agaaggtcctacttcaaattccaagtcatcgcaactgacaactatgggcagggactgagt
ggcaaagcggatgttctggtttccgtggtcaatcagctggacatgcaggtcattgtttcc
aatgtgcccccaactctggtggaaaagaagatagaagatctcacagagattttggatcgc
tatgttcaggagcaaattcctggtgccaaggtggtggtagagtccattggtgctcgcagg
catggggacgccttttctctagaagattataccaaatgtgacctgactgtctacgcagtc
gacccccagaccaaccgagccatagacagaaatgagctttttaaatttctggatggcaaa
ctgcttgatatcaataaagacttccagccgcattacggggaaggaggacgcattttggag
atccgcactccagaggcagtgaccagcattaaaaaacgaggagaaagtctgggctacacg
gaaggggccttgctggcactcgccttcatcatcatcctctgctgtattcctgccattttg
gtggttctggtcagctacagacagtttaaagtccgccaagctgagtgcaccaagacagcg
cgaatccagtcggccttacctgcggccaagcccgcggcgcccgcaccagcacccgtggcc
gtgcccccgccgcccccgcctccccctggggcgcacctgtacgaggagctgggggacagc
accatgtatgagatgcctcaatatggaagccgtcgccgtctgttaccaccggctggacca
gaggagtatggtgaggtagttggtgaagccgaggaggagtatgaggaggaagaggaagag
gcaaagaaaattagaaaaccaaaagtccaagttagagagcctagtgaggaggaagaagta
gtggtcaccattgagaagccaccaccagccaaacccacgtacacaacatggaagagagcc
aggatcttcccaatgattttcaagaaagttagaggtctcgctgaccaaaggggcctcgcc
gaacttgagggggaagagtggcagagacaccttgaggaggtggataaagattatctgaaa
ctcactctggaccaagatgaagccacagaaagcacagtggagtcagaggagtcatcgtcc
agtgactacactgagtacagtgaggaagaatccgagttcagcgagtcagagaccactgaa
gagtcggagtcagagacaccttcggagcaggaagagagctcgactcctgagtcttcagaa
gagtcagagtccacagagtcagacggggagaaggcccggaaaaacatctttctggccaga
aggcggcccgtcgttcaagaggtcaaggaggtcaaagggagaaaagaggagccccctgag
gagctggaggaagagcccagggtggaggaagcaggagaggagagtgagcaggtccttgag
gaggagccagcaggccttgaggtccctgaggaggaggaggagggcagtgtggagtcggcg
tcagtgggggcaggtggggacagtgaggaggactctgagccgggccacagtgtcagcagc
agcgagagtcagtccggagggccatggggcttccaggtgcccgagcaggccaccagcaag
aaagcaccccgggagcagcccccaggagacgactctgagggtgacaacacagcactctga
DBGET
integrated database retrieval system
