KEGG   Mirounga angustirostris (Northern elephant seal): 123846844
Entry
123846844         CDS       T11530                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
mano  Mirounga angustirostris (Northern elephant seal)
Pathway
mano03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mano00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123846844 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mano03041]
    123846844 (SMNDC1)
Spliceosome [BR:mano03041]
 Complex A
  U2 snRNP components
   U2 related factors
    123846844 (SMNDC1)
 Complex B
    123846844 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    123846844 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 123846844
NCBI-ProteinID: XP_045734747
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagttgaa
gctgcattgtctggaaatggagaaaatgaagatttgctaaaattaaagaaagatttacaa
gaagttatagaactaaccaaagaccttctgtcaactcagccttcagaaactcttgcaagt
tcagacagttttgcttctactcagcccactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttacgaagcggagatcgaggagatagatgaagaa
aatggcactgctgcaatcacctttgctggctacggcaatgctgaagtgaccccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccaacagcgtgaatataaaaagaagaaagctttgaaaaaa
gcccagagaataaaagaacttgagcaggaaagagaggaccagaaggttaaatggcaacag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaaaaggagtatttttgct
tcacctgagagtgtaaccggaaaagttggagtaggaacttgtggaattgctgataaacct
atgacacagtatcaagatacctctaaatacaatgtcaggcatttgatgcctcaataa

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