Mariniplasma anaerobium: MPAN_000530
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Entry
MPAN_000530 CDS
T07723
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
manr
Mariniplasma anaerobium
Pathway
manr03030
DNA replication
manr03410
Base excision repair
manr03420
Nucleotide excision repair
manr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPAN_000530 (ligA)
03410 Base excision repair
MPAN_000530 (ligA)
03420 Nucleotide excision repair
MPAN_000530 (ligA)
03430 Mismatch repair
MPAN_000530 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manr03032
]
MPAN_000530 (ligA)
03400 DNA repair and recombination proteins [BR:
manr03400
]
MPAN_000530 (ligA)
Enzymes [BR:
manr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MPAN_000530 (ligA)
DNA replication proteins [BR:
manr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MPAN_000530 (ligA)
DNA repair and recombination proteins [BR:
manr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MPAN_000530 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPAN_000530 (ligA)
MMR (mismatch excision repair)
DNA ligase
MPAN_000530 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MPAN_000530 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
Nlig-Ia
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
5_3_exonuc
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BCR35160
UniProt:
A0A7U9TH67
LinkDB
All DBs
Position
53108..55087
Genome browser
AA seq
659 aa
AA seq
DB search
MNVKLRIEELTNLINQANYDYHTLDKPTLTDYNYDQYLKELIDLENKNPEYKLSNSPTDK
IGGIVLDGFVKVNHKVPMMSLSNVFSFDELKAFDDRIKKVTSDYQYISELKIDGLAVSII
YENGQFVKAATRGNGLVGEDISENVKTIKSLPLKLNEDIDIEVRGEIYMPHKSFNKLNED
RLDHNLALFANPRNAAAGTIRQLDSRVAAKRNLDAFLYQIVNAQDYVDTQEEALNYLKKL
GFKINPHFHLSKDVDDLIQEIQKYDLLRKTLNYETDGVVIKINAFDMHEPIGYTAKYPKW
ATAYKFQAEQALTKLNDITFQIGRTGVITPVAELEPITISGSLVSRATLHNEDYIKAKDI
RIGDIVKVHKAGEIIPEVIEVDLSQRKDQQPFEMTQTCPVCGHLVERKPGEADYYCTNID
CPGKHMNALIHFSSRVAMDIDTLGEKVVETLHELGFLNSISDIYRLKDHKEELVGLPGFA
EKKVEKLILAIENSKSQSFDKLIFGLGIKHVGAKVAKVLVNHYPTIDKLKEATYDELTEI
NEIGEMIAQSVVSYFEKEENIKLIDELKSFNLNVSFEKEEIIEHEFNQKTFVLTGKLENY
TRDEAQAIIEKLGGKVSSSVSKKTDYVLAGSDAGSKLEKANKLGVKVLDEEDFKVKING
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaaaacttagaatagaagaactaacaaacttaatcaatcaagcaaattatgat
tatcatacacttgataagcctacacttactgattataattatgatcaatatctaaaagaa
cttattgatttagaaaacaaaaaccctgaatataaactttcaaattctccaacagataaa
attggaggtattgttttagacggatttgttaaagtcaatcataaagttcctatgatgagt
ctatcaaatgtatttagctttgatgagttaaaagcatttgatgatcgaattaaaaaagta
acgagtgattatcaatacatctcagaattaaaaattgacgggcttgcagttagcatcatt
tatgaaaatgggcaatttgttaaagctgcaactagaggcaatggacttgtcggtgaagac
atatcagagaatgttaaaacaatcaaaagtctaccacttaaattaaatgaagatatcgat
atagaagtcagaggcgaaatttacatgcctcacaaaagtttcaataaattaaacgaagat
agattagatcataatcttgcgttgtttgcaaatccaagaaatgcagctgcaggaactatt
agacagttagatagtcgcgttgcagccaaacgtaatttagatgcatttttatatcaaata
gtaaatgctcaagattatgtagatactcaagaagaagcattgaactatttaaaaaaatta
ggatttaagataaatcctcattttcatttgtctaaagatgtagatgatctaattcaagaa
atccaaaagtatgaccttttaagaaaaacactgaattatgaaacagatggtgttgttata
aaaatcaacgcttttgatatgcatgaacctattggatataccgcaaaatatcctaaatgg
gctacggcttataagtttcaagcagaacaagcattaactaaattgaatgatataacattt
caaatcggtagaacaggtgtaattacaccagttgcagaattagagccaattacaatatca
ggatctttagtctcacgtgcgacattgcataacgaggattatataaaagctaaagatatt
agaataggtgatatcgttaaagtacataaagcaggagaaattattcctgaagttatagaa
gttgatttatctcaaagaaaagatcaacaaccattcgagatgactcagacatgtcctgtt
tgtgggcacttagtggaaagaaaacctggtgaagcagattattattgtacaaatatagat
tgtccaggcaaacatatgaatgcattaattcatttttcatctagagtggcaatggatatt
gacacgttaggtgaaaaagtagttgaaacattacatgaactaggatttttaaattctatt
tcagatatttatagactaaaagatcacaaagaagaacttgttggtctaccgggatttgca
gaaaagaaagttgaaaaactaattttagcaattgaaaacagtaaatcacaaagttttgac
aaacttatctttggattagggattaaacatgtaggcgcgaaagttgcaaaagtattagtt
aatcattatccaactatcgataaactaaaagaagcaacttatgatgagttaactgagatc
aatgaaattggtgaaatgattgcacaatctgtagtttcatatttcgaaaaagaagaaaat
ataaaactaattgatgaactaaaatcttttaatttaaatgtatcatttgaaaaagaagag
attattgaacatgaatttaatcaaaagacatttgttcttacaggaaaactagaaaactat
acaagagatgaagcacaagctattattgaaaaattaggcggtaaagtcagttcgtctgtc
agtaaaaaaacagattatgttttagcaggctctgatgcaggctcaaaacttgaaaaagca
aacaaactaggcgtaaaagtattagacgaggaagacttcaaggtgaaaattaatggatga
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