Misgurnus anguillicaudatus (oriental weatherfish): 129415045
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Entry
129415045 CDS
T09481
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X2
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129415045 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129415045 (kdm2ba)
04121 Ubiquitin system [BR:
manu04121
]
129415045 (kdm2ba)
03036 Chromosome and associated proteins [BR:
manu03036
]
129415045 (kdm2ba)
Enzymes [BR:
manu01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
129415045 (kdm2ba)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129415045 (kdm2ba)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129415045 (kdm2ba)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129415045 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
129415045 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
DUF7885
F-box
PHD
Rubredoxin
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
129415045
NCBI-ProteinID:
XP_055025187
LinkDB
All DBs
Position
5:complement(18252317..18270629)
Genome browser
AA seq
860 aa
AA seq
DB search
MAMSLSADEEDYDSDTAEQQRLPNRPKSKMATSTATTPASASSSSTSTAVKLPSNRTSSG
ARRRRTRCRKCEACVRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVC
GEAGKEDTLDDEDEKFNAMLMECSICNEIVHPNCLKVKDAAGVVNDELPNCWECPKCNYA
GKTGKQKRGPGFKYASNLPGSLLREQKAGREGREEGDQTSTGTASLKRKTEREETPRLKS
EDLPSRLPPLLSPSGLPRPRSEVPNFLRKKRKLFDDDEEEEEATTKKKPKKLWRPEEPLL
PKLSHMKTEEEEDNSDEEEEKLEKREPPRRSFKKDYSMVRKEEEQDEDRREDRDLPFRSL
RQYSNMRKEVNQEEDKEEDEEEDEEDSKRGRDGSPTLKNHSLSLESDASRCSSPRAGPSS
EGSETQEKAPRARAKRHRRKPPNRQLSAELSKQLNMEIRRTEHSLANENQQPMKSEPEDS
ENEEPKRIGLRNGTTGNGGGGERGGGGDGGGERPHLRAREMNGSSWELRHFYPPQITPLG
LNRSSPAIRPLPARSPPKCVQMERHVIRPPPICPPPDRLPLADGRNHIAPREAWLAIFSH
LSHRELCVCMRVCRTWNRWCCDKRLWTCIDLKRCKSIIPLMLSGIIRRQPMTLDLSWTNI
SKKQLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDLQWVEGLKDPQMRDLLS
PPTDNRPGQMDTRSKLRNVTDLRLAGLDITDSSLRLIIKNMPLLLRLDLSYCNHINDQSV
NLLTAAGTTTRDSLTDVNLTVCNRITDQSLSYFKRCGNICRIDLRFCKQVSRQACERFIA
EMSVSVPFQLKEDKLLQKLS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtcactgagcgcggacgaggaggattacgactcggacacagccgaacagcaa
cggctacccaaccggccaaaatccaaaatggctacatcaacagcgacgactccagcatca
gccagttcttcatccacttcgacagcggtcaagttgccatccaaccggacctcctctgga
gcccgacgcagacgcactcggtgtcgaaagtgtgaggcgtgcgtccggacggaatgtgga
gagtgtcacttctgtaaggacatgaagaagtttggaggacctggtcgcatgaaacagtcc
tgcattatgagacagtgtatagcgcctgtgttaccgcacacagcagtgtgcgtggtttgc
ggcgaggctggtaaagaagacacactcgacgacgaagacgagaagttcaacgccatgctc
atggagtgctccatctgcaatgagatcgtccacccaaactgcctcaaggtaaaagacgca
gctggagtggtgaacgatgagcttcctaactgctgggaatgtcctaaatgcaactatgct
gggaagactggaaaacaaaaacggggcccagggtttaagtacgcatccaacctaccaggg
tctctgctgagggagcagaaagcaggacgtgaaggaagggaggagggagaccagacctcc
accggtacagcatcccttaagaggaagactgagagggaggagactcccagactgaagagc
gaggatctgccctcacgcctgccccctctactgagtcccagcggcctgccaagaccacga
tctgaagtgcccaactttttgaggaagaagaggaaattatttgacgacgatgaagaggaa
gaggaggctaccactaaaaagaagcctaagaagctctggaggcctgaggagcctttgctt
cccaaactctctcacatgaaaacagaagaggaggaagacaactccgatgaggaggaagaa
aagctggagaagcgagaaccgcctcgccgttcctttaagaaagactacagcatggtgaga
aaagaggaagagcaggatgaagataggcgagaagaccgggatctacccttcagatcccta
aggcagtatagcaacatgagaaaagaggtaaaccaggaggaggacaaggaggaagacgag
gaagaggatgaggaagatagcaaacgagggagagacggcagtcccacacttaagaaccac
tcactgtcgctcgagagcgatgcatcacggtgcagctccccaagggcagggcccagcagc
gaaggcagtgagactcaggaaaaggcaccgcgagcccgggcgaagcggcaccgtcgcaag
cctccgaacagacagctcagtgccgagctcagcaagcagctcaacatggagattcggcgc
accgaacactccctggccaacgagaaccagcagccgatgaagagcgaaccggaggacagc
gagaacgaagaaccgaaaagaattggtttgcggaacgggaccaccgggaatggcggagga
ggcgaaaggggaggaggcggagacggtggaggggagaggccgcacctgcgagcgagagag
atgaacggatcgtcgtgggagctgcggcacttctatccaccacagatcaccccgttaggc
ttgaaccgaagttcacctgccatcaggccgcttcccgctcgctcccctcccaagtgcgtg
cagatggaacggcacgtgatccggccgcctcccatctgccctccgcccgacaggctgccg
ctggccgatgggcgcaatcacatagctccacgagaagcttggttggctatctttagtcac
ttgagccatcgtgagctttgtgtgtgcatgcgtgtgtgccggacctggaatcgctggtgc
tgtgacaaaagattatggacttgcattgacctcaagcggtgtaagtccatcatccctctt
atgttgagcgggatcattcgcagacagcccatgactcttgacctgagctggaccaacatc
tccaagaagcaattaagctggcttatcaaccgactaccaggtctgagggtgctcctcttg
tccgggtgttcgtgggtggccgtttcagctctctgcacttccagttgtcctctactgcgt
actttagatctgcagtgggttgagggtcttaaagacccccagatgagagatctgctgtct
cctcccactgacaacagaccaggtcaaatggacacacgcagcaaactaagaaatgtcacc
gacttgcgtctggctggtctggacatcaccgacagctctctgcgtctcatcattaaaaat
atgcctttgcttttacgcctggacttaagttactgcaatcatatcaacgatcagtcggtc
aacctgctgactgctgcagggaccactactagagactccctaaccgatgtcaaccttacg
gtgtgtaacaggatcacagatcagtcgctgagctacttcaaacgctgcggaaacatctgt
cgcattgacctgcgcttctgcaagcaggttagccggcaggcgtgcgaacgcttcatcgcc
gagatgtccgtcagtgttcctttccaactgaaagaggataaactgctccagaagctcagc
tag
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