Misgurnus anguillicaudatus (oriental weatherfish): 129415354
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Entry
129415354 CDS
T09481
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu00900
Terpenoid backbone biosynthesis
manu01100
Metabolic pathways
Module
manu_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
129415354 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
manu01006
]
129415354 (ggps1)
Enzymes [BR:
manu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
129415354 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
129415354 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
129415354 (ggps1)
Prenyltransferases [BR:
manu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
129415354 (ggps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
GCSF
Motif
Other DBs
NCBI-GeneID:
129415354
NCBI-ProteinID:
XP_055025281
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All DBs
Position
11:complement(29494201..29527444)
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AA seq
322 aa
AA seq
DB search
MDGDERATSERILLEPYKYLLQLPGKQVRKKLSQAFNHWLNVPEDKLQVIIEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLDHPEAVRVFTRQL
LELHRGQGLDIHWRDTYTCPSESEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDLKPLLDT
LGLFFQIRDDYANLNSQEYSANKSFCEDLTEGKFSFPTIHAICSHPESTQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRQTLKDLEAEAYRLIVDLGGNPELEGLVKHLSRMYKEPE
VKSSVGQSEDPGSGSSDSQANL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatggagacgaaagagcaacttctgaaaggattcttctggagccgtacaagtacttg
ttacaactgccaggaaaacaagtccgaaagaaactctctcaagcattcaatcattggctc
aatgtcccagaggataaacttcaggttatcattgaggtgactgaaatgcttcacaacgcc
agtctgctgatagatgacattgaagatagctccaaactgcgacgtggtttcccggtcgct
cacagcatctacggcatcccgtccgtcatcaactcggccaactacgtctacttcttgggt
ctggaaaaggtgctgatgttagatcacccggaggcagtgcgcgtcttcacccgtcagcta
ctagagctgcaccgcggccaaggccttgacatccactggcgtgacacctacacctgtccc
agcgagtccgagtaccgcgccatggtgctgcagaaaaccggcggcttgttcggtctcgcc
gtgggactcatgcagctcttctccgattggaaacgagatctcaaacctcttttggacact
ctgggtcttttctttcagatacgcgacgactacgccaacctgaactcgcaagagtacagc
gccaacaagagcttctgcgaagacctgacggagggaaagttctcctttcctaccatacac
gccatctgctcgcatccagagagcacgcaggtgcagaacattttgcgtcagcgtaccgaa
aatatggatatcaaacgttactgcgtcgactatctggagaaagtgggatcgttcgcgtac
acccggcagacccttaaggatctggaagctgaagcgtaccggctgatcgtggacctggga
ggaaatccagaacttgagggcttggtgaagcatctgagtcggatgtacaaagagcctgaa
gtcaaaagttcagtcggacaatctgaagatcctggaagtggaagttcagacagccaagca
aatctatga
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