Misgurnus anguillicaudatus (oriental weatherfish): 129416976
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Entry
129416976 CDS
T09481
Symbol
thbs1a
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04115
p53 signaling pathway
manu04145
Phagosome
manu04148
Efferocytosis
manu04350
TGF-beta signaling pathway
manu04510
Focal adhesion
manu04512
ECM-receptor interaction
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129416976 (thbs1a)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129416976 (thbs1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129416976 (thbs1a)
04148 Efferocytosis
129416976 (thbs1a)
09143 Cell growth and death
04115 p53 signaling pathway
129416976 (thbs1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
129416976 (thbs1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129416976 (thbs1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129416976 (thbs1a)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129416976 (thbs1a)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Phagocytosis
Opsonins
129416976 (thbs1a)
Glycosaminoglycan binding proteins [BR:
manu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129416976 (thbs1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
cEGF
Laminin_G_2
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
129416976
NCBI-ProteinID:
XP_055027363
LinkDB
All DBs
Position
15:complement(257370..265767)
Genome browser
AA seq
1171 aa
AA seq
DB search
MMSLRFLLLCLVLWRSDCSRHAEVLDDNTVYDVFELTNVHKHHVGVSLVKGPDPNSPAYK
ILKPNLIPSVPEPSFRDLLFSIHTERGFILTANLKQAKRTRASLITVEMKDGSGSLFEII
SNGKANSVDLLYRSASGQQLVSIEDVDVADGQWRNLTLFIQEDRAQLHVGCEEINTQELD
LPIQQILSQDIADISELRVGKPATKSDRFMGVLQNVRFVFGTTVDAILRNKGCESSAFIT
DVMTLENISSPAIRTHYTGHKSKDLQDICGFSCEDLSGMFKELKGLGVVVKQLSNELRQV
TADNNLIKTQIKIHGGVCLHNGVVYNDRDEWTIDSCTHCTCQNSATVCREISCPLMPCAN
ATVPDGECCPRCGTPNDDAEDGWSPWSEWTHCSVTCGRGVQQRGRSCDRINRNCDGTSVQ
TRDCFTQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPTPQMGGRDCQGEGR
QTESCRMPLCPVNGGWGPWSLWDSCSVTCGGGLQRRHRLCNSPAPKYGGKDCLGEAKASR
LCNSQSCPIDGCLSNPCFAGTQCTSFPDGSWKCGDCPVGYTGDGINCQDIDECKEVPDAC
FVLNGVHQCENTEPGYNCLPCPSRYTGPQPFGRGMEQAVANKQVCTPRNPCEDATHDCNK
KANCIYLGVFSDIMYRCECKPGYAGNGHICGEDTDLDGWPNSDLTCVENATYHCKKDNCP
DLPNSGQEDYDKDGTGDACDSDDDNDGIPDDGDNCPFVFNPRQYDQDRDQVGDGCDNCPH
DSNPEQTDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNTEQKDSDWDGVGDHCDNCPLQ
HNPDQIDSDSDNVGDMCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDFDDD
NDGVPDDKDNCRLAPNPDQLDSDGDGRGDACKYDFDQDNVPDINDVCPENFAISETDFRR
FQMVPLDPTGTSQIDPNWVVRHRGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDRD
DDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLRNA
LWHTGDTQGQVRTLWHDPKNIGWKDYTAYRWQLVHRPKTGHIRVIMYEGKKVMADSGSIH
DKTYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctttgagatttctgcttttatgtctcgtgttgtggaggtctgactgcagcaga
catgcagaagtgctggatgataacaccgtttatgatgtgtttgagctcacgaatgttcat
aagcatcatgtaggagtgagtttagtgaagggtccggatccgaacagtccggcttataag
atcctgaagccgaacctgattccctccgtacccgagccctccttcagggaccttctgttc
tccattcacaccgagcgagggttcatcctcacggccaacctcaaacaagccaaacggacc
cgagccagtctgatcaccgtcgagatgaaagacggttccggttcgctctttgagatcata
tcgaacggaaaagcaaacagcgtggatctgctgtaccggagcgcgagcgggcagcagctc
gtgtccattgaagatgtggatgtggcggacggacagtggcggaacctcacgctgtttatt
caagaggaccgagctcaacttcacgtgggctgtgaggagatcaacactcaagaactcgat
cttccgatccaacagatcctgagtcaggacatcgcggacatctccgagctgagggtcggt
aaaccggcgactaaatcagatcgattcatgggagttctgcagaatgtgcgctttgtgttt
ggtacgacggtcgacgcgattttacgcaataaaggctgtgagagctccgccttcatcact
gacgtcatgactttagagaatatatcgagtccagccatccgcacacattacactggacac
aaatctaaagatttacaggacatctgtggtttctcctgtgaggatctgagcggtatgttt
aaagaactcaaaggtctcggtgttgtggtgaagcagctgtcaaatgagcttcgacaagtg
acagcagataacaacttaatcaagacccaaattaaaatccacggaggagtttgtctgcac
aacggtgttgtttacaacgatagagatgaatggacgattgacagctgcacacactgcacg
tgtcagaactctgctacagtgtgtcgtgaaatctcttgcccactgatgccctgtgccaat
gccaccgttccagatggtgaatgttgtccacgctgtggaacgccaaacgatgatgcagaa
gacggctggtctccctggtctgaatggacgcattgctctgtgacctgcggcagaggcgtt
caacagcgcggacgttcctgcgaccgaatcaacagaaactgcgatggcacatcggttcag
acgagagattgtttcactcaggagtgtgacaaacgcttcaagcaggacggaggttggagc
cactggtctccgtggtcgtcctgttcggtgacatgtggagacggcgtcatcacgcgaatc
cgcttgtgcaattccccaacaccacagatgggtggcagagactgccagggtgaaggtcgc
cagaccgagtcgtgtcggatgcctttatgcccagtgaatggaggttggggaccgtggtca
ctatgggattcttgttctgtcacgtgcggtggaggacttcagcgcagacatcgtctctgt
aacagccctgcccccaaatacggtggtaaagactgtctgggagaagccaaagcaagccgt
ttgtgcaattctcaatcgtgtccaattgatggatgtctgtctaacccgtgctttgccggc
actcaatgcacaagcttccctgacggctcctggaaatgtggagattgtccagttggatac
actggagatggaatcaactgtcaagacattgatgagtgcaaagaagtaccagatgcctgt
tttgtgctgaatggagtccatcagtgtgagaacacagaaccgggttacaactgcctgccc
tgcccgtcaagatacaccggaccacagcccttcggcaggggaatggagcaggccgttgcc
aataaacaggtctgcacaccaagaaacccatgcgaggatgccacccacgactgcaataag
aaagccaattgcatttatctgggcgtcttctccgacatcatgtaccgctgtgaatgtaaa
ccgggctacgctgggaacggtcacatctgtggagaggacacagacctggacggctggcca
aacagcgatctcacctgtgtggaaaatgcaacttatcactgcaagaaggacaactgtcct
gatcttcccaactctgggcaagaagactacgacaaagacggtaccggcgacgcttgcgat
tctgacgacgataatgatgggatccctgatgatggggacaactgcccgttcgtctttaac
ccaagacagtacgaccaagaccgcgatcaagttggtgatggatgcgataactgcccacat
gacagcaatccagaacagacggacaccgacaacaatggcgagggagacgcttgtgccatc
gacattgatggtgatggcattctgaatgagaaggacaactgcccatatgtgtacaacacc
gagcagaaagacagcgactgggacggagtcggtgatcactgtgataactgtccattacag
cacaaccctgaccagatcgactcagactctgacaatgtcggagacatgtgtgacagcaac
caggacatcgatgaggacggacatcaaaacaaccttgacaactgcccgtacgtccccaac
gccaaccaggccgaccacgataaagatggcaaaggagacgcctgcgattttgatgacgac
aacgatggcgtacccgatgacaaagacaactgccgacttgctcccaacccagaccagtta
gattctgacggtgatggccgaggcgacgcctgcaagtatgactttgaccaagataacgtg
cctgatattaacgacgtttgcccagagaactttgccatcagcgaaacagatttccgcagg
ttccagatggttcctcttgaccccacgggaacttcgcaaatcgatcccaactgggtcgtc
cgtcaccggggcaaagaacttctgcagacggtcaactgtgatcctggcatcgctgtcggt
tacgacgagttcaatgccgtggacttcagcggcactttctttatcaacaccgaccgggat
gacgactacgccggcttcgtgttcggctaccagtccagttctcgattttatgtggtgatg
tggaagcagatcacgcaaacctattggtctcatacacccaccaaagcccagggttactct
ggactgtccattaaagtcgtcaactcgaccacaggaccaggcgagcatctcaggaacgct
ttgtggcataccggagacactcaaggacaagtgcgtaccctgtggcacgacccgaagaac
atcggctggaaggattacacggcctacagatggcaactggtccacagacccaaaactgga
cacattagagttattatgtatgaagggaagaaagtcatggctgattctggaagtatacat
gacaaaacctacgcgggcggaagactcggcctcttcgtcttctctcaagagatggtttac
ttctcagacctcaaatatgaatgtagagatgtataa
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integrated database retrieval system
